Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1879 ATGGAGCTCAGCAAGGTGACGCTGGAGATCTTCTCTAAATTGGAGCAGAAATGGCTGTCTCACTGTGAAGCCTCTAAGAAAACTCGCATTCTCAGCATCGACGGTGGAGGAACCACCGGCATTGTCGCTGGAGCCGCCCTCCTCCACCTTGAGCAACAGATCCGTCTCCAGACCGGCGATTCCGACGCACATATTGCCGATTTCTTTGACATGGTTGCTGGTACTGGCATTGGCGCCGTCCTTGCCGCCATGATCACCGCCGACGATGGGTCCGGCAGGCCTCTATATACTGCTAAGGATGCCGTCCATGTCCTCACCAAAAGGAATTCGGAACTCTACAAGCCTAAGACCGCCGGAGTTTTTCGCAGTCGCCGGAGACTGTCTTCCAAGAGCATGGATAACGTGTTGAAGCAAGTATTCCAGAGAAGAGAAGACGGAAAGTTGTTGACCTTGAAGGACACGTGTAAACCCCTGCTTATCCCTTGCTTTGACCTCAAGAGTTCGGCGCCATTCGTGTTTTCCAGAGCTGACGCGTCCGAATCGCCGAGCTTCAACTTCGAGCTCTGGAAGGTATGCCGCGCCACCACAGCCACACCGAGCCTCTTCAAGCCCTTCCATTTCACTTCCGTGAACGGCAAGACCAGCTGCTCCGCCGTCGACGGCGGTCTGGTGATGAACAACCCGGCGGCGGCGGCCGTGACTCACGTGCTACATAACAAGCGGGATTTCCCGACAGTGAACGGCGTGGAGGATCTCCTAGTACTGTCCTTAGGCAACGGTGTGTCCGGTGGAACACAAGCACGAAAGATATGTGATAACGGCGAGTGTTCCACGTCGTGCGTGGTCGACATTGTGGCGGATGGGGTCTCCGAGACGGTCGACCAAATGTTGGGGAACGCCTTCTGTTGGAACCATACGGATTACGTAAGGATTCAGGCGTTGGGTTTGGGAAGGACGAGAGAGGAAGTGCTGAAAGAAAGAGGACTAGAGTCATTAGCATTTGGTGGGAAGAGATTGCTGAAAGAGAGTAACGAAGAGAGAATCGATAGCTTCGTGCAGCGGCTCGTTGCTTCTGGAAAGTCCAGCCTCCCACCTAGTCCCTGCAAGCATTCCGCCGGCGCCGTTACTCCTCTCGCCGTCGCCGAGGCTCGCTAG 1155 0.5524 MELSKVTLEIFSKLEQKWLSHCEASKKTRILSIDGGGTTGIVAGAALLHLEQQIRLQTGDSDAHIADFFDMVAGTGIGAVLAAMITADDGSGRPLYTAKDAVHVLTKRNSELYKPKTAGVFRSRRRLSSKSMDNVLKQVFQRREDGKLLTLKDTCKPLLIPCFDLKSSAPFVFSRADASESPSFNFELWKVCRATTATPSLFKPFHFTSVNGKTSCSAVDGGLVMNNPAAAAVTHVLHNKRDFPTVNGVEDLLVLSLGNGVSGGTQARKICDNGECSTSCVVDIVADGVSETVDQMLGNAFCWNHTDYVRIQALGLGRTREEVLKERGLESLAFGGKRLLKESNEERIDSFVQRLVASGKSSLPPSPCKHSAGAVTPLAVAEAR 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1879 384 PANTHER PATATIN-LIKE PROTEIN 6 1 372 - -
Acco02g1879 384 CDD Pat17_PNPLA8_PNPLA9_like 30 313 - -
Acco02g1879 384 Gene3D Cytosolic phospholipase A2 catalytic domain 17 363 - -
Acco02g1879 384 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 31 233 IPR002641 GO:0006629
Acco02g1879 384 Pfam Patatin-like phospholipase 31 232 IPR002641 GO:0006629
Acco02g1879 384 SUPERFAMILY FabD/lysophospholipase-like 26 315 IPR016035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1879 Acco-ChrAcco02 14922982 14924335 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1879 1 379 Acyl Lipid Metabolism Gene Families AT3G63200 74.346 0.0 578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1879 02 14922982 14924335 Acco06g0540 06 3362385 3363613 CCT
Acco02g1879 02 14922982 14924335 Acco02g1879 02 14922982 14924335 ECH