Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0513 ATGCCGATGGCGGCTGGGCCAGCAGTGCCGACCGATCACGCTCCTCCCATGGCGCCGATGCAATCAACACCCATTATGGTTTCGGACTCCTTTGCTAAAGACGCTATTATTACTTGGTTCCGCAGCGAATTTGCCGCCGCCAACGCCGTTATTGACGCTCTCTGCGGTCACCTTGCTCAGCTGAGCGCAGCCACTGGAGCCTCCGACTATGATTCTGTTTTTTCCGCAATTCATCGCCGGAGATTGAACTGGATACCGGTCATACAAATGCAGAAGTATCACTCAATAGCTGAAGTGGCCGTGGAGCTTCGCAAAGTCGCTGAGAAGAAGACAGAGGACATAGAAAAGAGGCAAGATAACTGCAAGAGTGAGGAGGTGAACACTTGTTCGGAAGACAAGAAGAAAATCAACCAGAAAACAATGGATAGTGATGGGAATGGCGGCGACGAGGCTCCTGAAGAGTATGATTCGCCGGAAAGTGAAATTACCGATTCAGGATCTCAAGAAATGCAAGCCAGTTTGATGAACAGCAGTATATGCTCCAACCACGAAGAATGTGAAGGACGTGGTGCCCAGATAAAGTTGACGAAAGGTTTCTCGGCAAAGGAGTCAGTGAAGGGGCACATGGTGAATGTAGTGAAAGGATTGAAGTTATATGAGGACGTTTTGAGTGATTCGGAACTCTGCAAGCTCTATGATTTCGTCAATGAGATTCATTCTGCTGGTCAAAATGGGGAACTCTCAGGTGAAACTTTTATACTGTTCAACAAACAGATGAAGGGCAATAAGAGAGAGCTGATTCAGCTTGGTGTTCCAATTTTTGGACAGATCAAGGAGGATGCAAAAAGCGATATAGAGCCAATTCCAGCTCTTCTTCAAAGTGTCATTGATCATCTCATTCAGTGGAAACTACTTCCAGAGTACAAAAGGCCGAATAGTTGCATCATCAACTTTTTTGAAGAGGGGGAGTATTCTCAGCCATTCCTTAAACCACCTCACCTGGACCAGCCCGTGTCTACTCTGCTTCTCTCTGAATCAACTATGGCTTTCGGGCGTACCCTTACCAGCGATAGTGATGGGAACTACAAAGGGCCGCTCATGCTCTCACCCAAGAATGGGTCTCTGCTAGTGATGAGAGGGAACAGTGCTGACATGGCAAGGCATGTGATGTGCCCATCCCCAAACAGAAGGGTCAGCATCACCTTTTTCAGGGTAAGGCCAGACTCCAACCAAAGCCAAACACCAATTCCTTCGATGGCAACAGCAATGACTGTTTGGCAACCGGGAATAGCAAGTAGCCCATATGCTTTTGCAAATGGAGCTGTCAGTGGCAGTGAGGCCATGGACATGACGATGCCCAAATGGGGAATAATTCGTGCCCCAATGGTCATGCTTACCCCTATGCGTCCTATGGTGTTGAGTTCTCGCAAGCTTCCTCGTGGTGGTGGTGGGACAGGGGTGTTCTTGCCCTGGAACGTCCCTTCCAGAAAACATGCCAAGCATCTTCCTCCTCGTGCCCAGAAAGGACGGCTTCTGGCTTTGCCTCCCCCAGTTGAGTCACCCCCTCACATGGAAGAGTCCACTTCTGACCCCGCCATTACTGTTGAAGCACAAGTATGA 1620 0.4907 MPMAAGPAVPTDHAPPMAPMQSTPIMVSDSFAKDAIITWFRSEFAAANAVIDALCGHLAQLSAATGASDYDSVFSAIHRRRLNWIPVIQMQKYHSIAEVAVELRKVAEKKTEDIEKRQDNCKSEEVNTCSEDKKKINQKTMDSDGNGGDEAPEEYDSPESEITDSGSQEMQASLMNSSICSNHEECEGRGAQIKLTKGFSAKESVKGHMVNVVKGLKLYEDVLSDSELCKLYDFVNEIHSAGQNGELSGETFILFNKQMKGNKRELIQLGVPIFGQIKEDAKSDIEPIPALLQSVIDHLIQWKLLPEYKRPNSCIINFFEEGEYSQPFLKPPHLDQPVSTLLLSESTMAFGRTLTSDSDGNYKGPLMLSPKNGSLLVMRGNSADMARHVMCPSPNRRVSITFFRVRPDSNQSQTPIPSMATAMTVWQPGIASSPYAFANGAVSGSEAMDMTMPKWGIIRAPMVMLTPMRPMVLSSRKLPRGGGGTGVFLPWNVPSRKHAKHLPPRAQKGRLLALPPPVESPPHMEESTSDPAITVEAQV 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0513 539 Gene3D - 199 413 IPR037151 -
Acco06g0513 539 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 310 407 IPR005123 -
Acco06g0513 539 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 32 511 IPR044842 GO:0003729|GO:0006402|GO:0032451
Acco06g0513 539 MobiDBLite consensus disorder prediction 499 539 - -
Acco06g0513 539 MobiDBLite consensus disorder prediction 125 171 - -
Acco06g0513 539 MobiDBLite consensus disorder prediction 125 140 - -
Acco06g0513 539 Pfam 2OG-Fe(II) oxygenase superfamily 314 404 IPR044861 -
Acco06g0513 539 SUPERFAMILY Clavaminate synthase-like 206 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0513 Acco-ChrAcco06 3186136 3190296 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1918 02 15350715 15355083 Acco06g0513 06 3186136 3190296 CCT
Acco06g0513 06 3186136 3190296 Acco06g0513 06 3186136 3190296 ECH