Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1918 ATGGCAACAGCCCCTGTTCCGCCGCCGATCGATCATGTTCTTCCGGCCAGGACGACAATGCTGCCGATGCAACCACCGCCCATGTTCATTTCTGACTCCTTTGCTATGATTTCCTGGTTTCGCAGTGAGTTTGCCGCTGCAAACGCCATCATCGACGCCCTTTGTGGTCATTTAGCTCAGCTCGGAGATGTCTCTTGTGACTATAAGTCTGTGTTCACAGCAATTCATCGTCGTCGACTTAACTGGATCCCAATACTGCAGATGCAGAAATATGACTCCATAGCCGAGGTGACGTTGGAGCTCCGCAAGGTGGTGGAGAAGAAAGGCGAGACTAAGGAAATCGGGGAAGGCGAAGGAAGGATTGAGGATTTGGGGAATCACTTGGATGAGGAAAAGAAAATCGAAGAGAAGAGAACGGAGAATAATGTAAATTCTGAAGGCGACGAATGTCCTGAAGAGTATGAATCGCCCAACAGTGAAATTACTGATTCAGGAAGTCAAGAAATGCAAGGAAAATCGATGAACGTTAGCATATGTTCAAATCATGAAGAATGCCAAGGACGTTCTTCACAGATAACGTTGAGGAAAGGTTTTCAGGCGAAGGAGACAGTGAGGGGGCATATGGTCAATGTTGTGAAGGGATTGAAGCTATACGAGGACATTTTCACCGATTCTGAACTCAGCAAGCTCACTGATTTTGTCAACGAGCTTCATGCTGCTGGCCAGAATGGAGAACTCTCTGGAGAAACTTTTATACTATTTAACAAGCAAATGAAGGGTAACAAACGAGAGATGATTCAGCTGGGCGTGCCAATTTTTGGACAGATAAAGGAGGATTCAAACAGCAACATAGAGCCAATTCCATCTTTCCTCCAAAGTGTCATTGATCACCTTATCCAATGGCGTTTGCTTCCTGAATACAGAAGACCAGATGGCTGTATCATTAACTTTTTCGAAGAGGGGGAATATTCTCAGCCATTCCTGAAACCACCACACCTGGATCAACCTCTGTCCACTCTTCTTCTTGCTGAATCAACTATGGCTTTTGGGCGTACCCTTGTGGGCGAAAATGATGGGAACTACAAAGGGCCACTCATGCTCTCATTGAAGAAGGGGTCTCTTCTGGTGATGAGAGGAAACAGTGCTGACATGGCGAGGCACGTCATGTGTCCATCCCCAAACAGAAGGGTCAGCATCACCTTCTTCAGAGTGAGGCCAGACTCCAATCAATGCCAATCACCAACTCCTTCAGTGATGAATGCCATGACTTTCTGGAAACCTGGAATTTCTGGTCAATACGCGTTGCCAAGTGTACCTCCCAGTGGGACCGAGGCAATGGGAATGATGCCCAAATGGGAAATTTTCCAAGCTCCAATGGTGATGTTAGCCCCTGTGAGCCCTCGAAAATTGGCTAGTGGTGGAGGAACTGGGGTATTCTTGCCCTGGAATGTGCCATCCAGAAAACCTGCAAAGCATCTTCCACCACGTGCCCAACGAGGACGACTTCTAGCATTACCTTCCTCAGTTGAATCAAACACATCAGACTCTTCTTCTGAACCCAGCATTAGTACTTGA 1575 0.4705 MATAPVPPPIDHVLPARTTMLPMQPPPMFISDSFAMISWFRSEFAAANAIIDALCGHLAQLGDVSCDYKSVFTAIHRRRLNWIPILQMQKYDSIAEVTLELRKVVEKKGETKEIGEGEGRIEDLGNHLDEEKKIEEKRTENNVNSEGDECPEEYESPNSEITDSGSQEMQGKSMNVSICSNHEECQGRSSQITLRKGFQAKETVRGHMVNVVKGLKLYEDIFTDSELSKLTDFVNELHAAGQNGELSGETFILFNKQMKGNKREMIQLGVPIFGQIKEDSNSNIEPIPSFLQSVIDHLIQWRLLPEYRRPDGCIINFFEEGEYSQPFLKPPHLDQPLSTLLLAESTMAFGRTLVGENDGNYKGPLMLSLKKGSLLVMRGNSADMARHVMCPSPNRRVSITFFRVRPDSNQCQSPTPSVMNAMTFWKPGISGQYALPSVPPSGTEAMGMMPKWEIFQAPMVMLAPVSPRKLASGGGTGVFLPWNVPSRKPAKHLPPRAQRGRLLALPSSVESNTSDSSSEPSIST 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1918 524 MobiDBLite consensus disorder prediction 116 173 - -
Acco02g1918 524 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 35 512 IPR044842 GO:0003729|GO:0006402|GO:0032451
Acco02g1918 524 Gene3D - 197 413 IPR037151 -
Acco02g1918 524 MobiDBLite consensus disorder prediction 505 524 - -
Acco02g1918 524 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 309 406 IPR005123 -
Acco02g1918 524 SUPERFAMILY Clavaminate synthase-like 204 405 - -
Acco02g1918 524 MobiDBLite consensus disorder prediction 157 173 - -
Acco02g1918 524 MobiDBLite consensus disorder prediction 116 145 - -
Acco02g1918 524 MobiDBLite consensus disorder prediction 484 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1918 Acco-ChrAcco02 15350715 15355083 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1918 02 15350715 15355083 Acco06g0513 06 3186136 3190296 CCT
Acco02g1918 02 15350715 15355083 Acco02g1918 02 15350715 15355083 ECH