Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0503 ATGGCGGATCAAAGGGTGTCCTGGCGTGGCATTGGTTCGTACATGCTGCTTTTCTTGTGTTTGATACAGATACAGAGTCATCTATATGTGCGTGCCATTTTGGACCCTGTTGATTTCTTGGCTCTGCAATCCATTCACAAGTCTCTGCAAGACATGCCGGGATCCAGTTTCCTTTCTTCTTGGGATTTCACTTCCGACCCATGTAATTTCGCCGGCGTTTACTGTGATTCCGATAAGGTTGTTGCTCTCAATCTCGGGGACCCCAGAGCCGGTGCCCCTGGCCTAACCGGAAAACTAGACCCAGCCATCGGCAGGGTATCTGCTCTCACCGAGTTCACGGTAGTCCCGGGTAGGATATACGGCCCTCTGCCGCTGACATTATCCAACTTGAAGAGCCTCCGGTTCCTTGGCATCAGCCGGAACTTCATTTCCGGTGAGATTCCTTGGACCCTGGGTCAGTTGCACAATCTCAAAACCATCGACCTCAGCTACAATCAGTTGACTGGAAGCATTCCTCCGTCCATCGGAGCATTACCCGGCTTAAACAATGTGATCCTCTGCCACAACCGTCTCTCCGGTTCGGTGCCTAAGTTTGCATCGCCGACGCTAACCCGGCTCGACCTGAAGCACAATGCGCTCTCCGGGACGCTGGCTCCCGATTCTCTCCCGGCCTCCCTCCAATATCTGTCTCTATCATGGAACCAGTTGAGTGGGCCAGTGGATCGGCTGCTGAACCGGATGGACCAACTGAATTATCTGGATCTTAGCCTCAACAAGTTCTCGGGTATAATTCCGGGTCGGATATTCTCGTTTCCGCTCACCAATTTACAATTAGAAAGGAATGAATTTTGGGGGGCAGTGCAACCGGTTGATCAGGTGAAAATCCCAACCGTTGATCTGAGCTACAACAGGCTGTCGGGCCAAGTGTCGCCCATGTTCTCGACCATACAGAATCTATACCTAAACAACAACCGGTTCACGGGTCAGGTTCCGAGCAGCTTCGCGGAGCGGCTGTTGGATGCGACCATACAGATACTCTACTTACAGCACAATTTTCTGACGGGGATAGCGATCAGCCCGACGGCTGAGATTCCTCTAAGCAGCTCCTTGTGTCTACAGTATAATTGCATGGTCCCACCCATAGATACCACTTGCCCTCTGAAAGCAGGGAAACGGATATCTAGGCCTTCTTCCCAGTGCAGCCAATGGAGGAGGGGCTAA 1221 0.5209 MADQRVSWRGIGSYMLLFLCLIQIQSHLYVRAILDPVDFLALQSIHKSLQDMPGSSFLSSWDFTSDPCNFAGVYCDSDKVVALNLGDPRAGAPGLTGKLDPAIGRVSALTEFTVVPGRIYGPLPLTLSNLKSLRFLGISRNFISGEIPWTLGQLHNLKTIDLSYNQLTGSIPPSIGALPGLNNVILCHNRLSGSVPKFASPTLTRLDLKHNALSGTLAPDSLPASLQYLSLSWNQLSGPVDRLLNRMDQLNYLDLSLNKFSGIIPGRIFSFPLTNLQLERNEFWGAVQPVDQVKIPTVDLSYNRLSGQVSPMFSTIQNLYLNNNRFTGQVPSSFAERLLDATIQILYLQHNFLTGIAISPTAEIPLSSSLCLQYNCMVPPIDTTCPLKAGKRISRPSSQCSQWRRG 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0503 406 Pfam Leucine Rich repeat 200 215 IPR001611 GO:0005515
Acco06g0503 406 ProSiteProfiles Leucine-rich repeat profile. 156 178 IPR001611 GO:0005515
Acco06g0503 406 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 16 404 - -
Acco06g0503 406 SUPERFAMILY L domain-like 48 378 - -
Acco06g0503 406 Gene3D Ribonuclease Inhibitor 200 384 IPR032675 -
Acco06g0503 406 Gene3D Ribonuclease Inhibitor 38 199 IPR032675 -
Acco06g0503 406 Pfam Leucine rich repeat N-terminal domain 38 76 IPR013210 -
Acco06g0503 406 FunFam Nuclear pore complex protein NUP107 36 197 - -
Acco06g0503 406 Pfam Leucine Rich Repeat 156 178 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0503 Acco-ChrAcco06 3112064 3113284 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0503 41 355 Receptor kinase-like Gene Family AT5G62230 30.723 1.72e-35 137
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1930 02 15426737 15428542 Acco06g0503 06 3112064 3113284 CCT
Acco06g0503 06 3112064 3113284 Acco06g0503 06 3112064 3113284 ECH