Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0496 ATGGAGGGCCAGGCAACAAAAACTGAGGAGCAGTGTCGACAGAGAGAGATATTTGTGAAGCGAAACAGAGCTGCTAAGATGACCCAACAAGACAGAGACCACACCAACTCTCTCGTCCCCTCCATGTTGAGTGCTTTGAGAAAATCAATGGTGTCTTGTCGGATGTATCCTCCCGACGATGTAATCTCTGCCGTCCCTCATGACTTCGAAACTGGATGGCCCACCGACGTTCGGCACATCACTCATGTCACTTTCGATCGCTTCAATGGCTTCCTGGGTCTTCCTGTCGACCTCCAGGTCGAGATTCCGGGTCGGGTCCCCAGCGCCAGTGCGAGCGTGTTTGGCGTCTCAGCAGAATCAATGCAGTGTTCTTATGATTCAAAAGGGAATAGTATCCCAACTATCCTGTTATTAATGCAGGAGCGTCTATACTCACAGGGAGGCCTAGAGGCTGAAGGAATTTTTCGCATAAACCCAGAGAACAGTGAAGAGGAGAATGTGAGGGGGCAGTTGAACAGAGGGATTGTGCCGGACGACATTGATGTACATTGTTTGGCAGGTCTAATCAAGGCCTGGTTTCGAGAGCTGCCTTCTGGAATTCTAGATGGGCTTTCTCCAGAGCACGTTCTTCAGAGCAATACAGAAGAAGAATACGTTGAACTTGTAAAGCAATTAAAGCCCACGGAAGCTGCCTTGCTCAACTGGTCTGTTGATCTCATGGCTGATGTTGTTGAACACGAAGAACACAACAAAATGAATGCAAGAAATATTGCCATGGTCTTTGCTCCCAACATGACTCAGATGTCTGATCCACTTACTGCTTTGATGCACGCGGTCCAAGTGATGAACTTACTCATGACTCTTATAATGAAGACACTCACGGAACGAGAAGAAGCGGCAGGTTCACCCGCGTCGTCTCATTCATCTGAGGATGAATATGAAAGTGAAGAAGAAATGGATACTAGTGATGGCGAAGAAGAGGAGGAGGAAGCCGAACCATCATTATGTGAGATAGAAGAATATGCTATGTCATATTCTGAAAGCGAAACTAGGAATTCTATTTCCAGTTCTTCATGCGAAGAAAAGTCCGTGAGATCCAGTGTTGACTCAACTAGTGCATCCATAAAATACCCAGGCAACAGTAACGTGGAGATAAATACTAAATTGTCAGACTCATTGCCCGGTACCACCGTATGCATCAACAAGTGA 1209 0.4665 MEGQATKTEEQCRQREIFVKRNRAAKMTQQDRDHTNSLVPSMLSALRKSMVSCRMYPPDDVISAVPHDFETGWPTDVRHITHVTFDRFNGFLGLPVDLQVEIPGRVPSASASVFGVSAESMQCSYDSKGNSIPTILLLMQERLYSQGGLEAEGIFRINPENSEEENVRGQLNRGIVPDDIDVHCLAGLIKAWFRELPSGILDGLSPEHVLQSNTEEEYVELVKQLKPTEAALLNWSVDLMADVVEHEEHNKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLMTLIMKTLTEREEAAGSPASSHSSEDEYESEEEMDTSDGEEEEEEAEPSLCEIEEYAMSYSESETRNSISSSSCEEKSVRSSVDSTSASIKYPGNSNVEINTKLSDSLPGTTVCINK 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0496 402 MobiDBLite consensus disorder prediction 345 381 - -
Acco06g0496 402 MobiDBLite consensus disorder prediction 311 336 - -
Acco06g0496 402 SUPERFAMILY GTPase activation domain, GAP 111 290 IPR008936 -
Acco06g0496 402 PANTHER MKIAA1688 PROTEIN 9 367 IPR044785 GO:0005096
Acco06g0496 402 Pfam RhoGAP domain 133 267 IPR000198 GO:0007165
Acco06g0496 402 CDD CRIB 70 109 - -
Acco06g0496 402 ProSiteProfiles Rho GTPase-activating proteins domain profile. 116 297 IPR000198 GO:0007165
Acco06g0496 402 SMART PBD_5 71 105 IPR000095 -
Acco06g0496 402 CDD RhoGAP 133 291 - -
Acco06g0496 402 MobiDBLite consensus disorder prediction 296 381 - -
Acco06g0496 402 Gene3D Rho GTPase activation protein 102 305 IPR008936 -
Acco06g0496 402 SMART RhoGAP_3 130 293 IPR000198 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0496 Acco-ChrAcco06 3068442 3070628 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1948 02 15616231 15618531 Acco06g0496 06 3068442 3070628 CCT
Acco06g0496 06 3068442 3070628 Acco06g0496 06 3068442 3070628 ECH