Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1948 ATGATGGGGCTCGTGATGGTGACGAAGGGCGGAGGGTGCGGCGGAGGGAAGGAAACGAAGAGAGGAAGAACCGCCGCCGAAGAAGAGCAGAACCAGCTGTCACTCGTTGCACTCCTCTTGGCCGCTTTGAGGAAATCTATGGTGTCGTGTCGGGTGGATCGACCGGACGAGGTTATACCCTCCGTTCATCACATGGAAATCGGATGGCCTACCAACGTTCAGCATATCACTCATGTCACTTTCGATCGCTTCAATGGTTTTCTGGGTCTTCCCGTTGAGTTCGAGATCGAGATCCCGGGTCGGGTTCCCAGTGCTAGCGTAAGTGTGTTTGGCGTGTCAGCGGAATCCATGCAGTGTTCTTATGATTCAAAAGGAAATAGTGTGCCCACTATTCTCTTACTTATGCAGGAGCGTTTATACTCACAGGGAGGCCTGAAGCGGGAAGGAATATTTCGCATAAACCCAGAAAACAGTCAAGAAGAACATGTGAGGGACCAGTTGAATAGGGGGATTGTGCCAGATGACATTGATGTGCACTGTTTGGCGGGCTTAATTAAAGCCTGGTTTCGAGAGCTTCCTTCAGGAGTCCTTGATGGACTTTCACCCGAACAGGTTCTTCAGTGCAACACTGAAGAAGAATCTGTTGAGCTCGTGAAGCAGCTAAAACCAACTGAGGCTGCCTTGCTCAACTGGGCTATTGATCTCATGGCTGATGTTGTAGAGGAGGAAGAATTCAACAAAATGAATGCAAGAAATATTGCAATGGTTTTTGCTCCAAATATGACTCAGATGTCTGATCCATTAACTGCTCTGATGCATGCGGTCCAAGTGATGAACTTGTTGAAGACCTTGATAATGAAGACTCTTAGAGAACGTGAAGAAACAACGACGGGTGGATATTCACCAATGTCACTTCGTTCATCAGATCGCCAGTCTGAGGAGGGGTATGACAGTGAGCAAGAAATGGAGACCAGTGGTGAGTTAAGAAGAAAGAAGTCAGATTATGATGGACATGCACACTACAGCCGCAGCAGTGAAGAGGAAGAAGAAGGCAGTGCTGAATCCTTGAGTGACATCGAGGAATGCTTCTTGAAGCAGTTGGATGAGCACACAGAAGAACACTCAGAAGAACCTGGAGGAGATTTGCAGGAGGACTGTGCTAGCCCCATAAGTCGCTCTGGCAGTAACATGGAAACTGCTATGTCATTTACTGATAGTAAAACCAAGAATTCTTGCTTGAGTTGCTCGCACAGTGAAAAATCAAGGACATCTCAGACTGCCGGGGGATTGAAAATTGATACGAGTAGTCCGTCTCTAGCATGTGCAGGCAGCAATGATATGGAGTTGATGGTTAAATTTACAGGTTCTGTTTCTCCAGTGCCTATGTTTACCTCCAATTAG 1401 0.4725 MMGLVMVTKGGGCGGGKETKRGRTAAEEEQNQLSLVALLLAALRKSMVSCRVDRPDEVIPSVHHMEIGWPTNVQHITHVTFDRFNGFLGLPVEFEIEIPGRVPSASVSVFGVSAESMQCSYDSKGNSVPTILLLMQERLYSQGGLKREGIFRINPENSQEEHVRDQLNRGIVPDDIDVHCLAGLIKAWFRELPSGVLDGLSPEQVLQCNTEEESVELVKQLKPTEAALLNWAIDLMADVVEEEEFNKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLIMKTLREREETTTGGYSPMSLRSSDRQSEEGYDSEQEMETSGELRRKKSDYDGHAHYSRSSEEEEEGSAESLSDIEECFLKQLDEHTEEHSEEPGGDLQEDCASPISRSGSNMETAMSFTDSKTKNSCLSCSHSEKSRTSQTAGGLKIDTSSPSLACAGSNDMELMVKFTGSVSPVPMFTSN 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1948 466 MobiDBLite consensus disorder prediction 292 356 - -
Acco02g1948 466 SUPERFAMILY GTPase activation domain, GAP 108 286 IPR008936 -
Acco02g1948 466 SMART RhoGAP_3 126 289 IPR000198 GO:0007165
Acco02g1948 466 MobiDBLite consensus disorder prediction 310 350 - -
Acco02g1948 466 SMART PBD_5 67 101 IPR000095 -
Acco02g1948 466 ProSiteProfiles CRIB domain profile. 67 80 IPR000095 -
Acco02g1948 466 PANTHER MKIAA1688 PROTEIN 24 424 IPR044785 GO:0005096
Acco02g1948 466 Gene3D Rho GTPase activation protein 99 293 IPR008936 -
Acco02g1948 466 MobiDBLite consensus disorder prediction 388 438 - -
Acco02g1948 466 Pfam P21-Rho-binding domain 66 93 IPR000095 -
Acco02g1948 466 CDD RhoGAP 129 285 - -
Acco02g1948 466 ProSiteProfiles Rho GTPase-activating proteins domain profile. 112 293 IPR000198 GO:0007165
Acco02g1948 466 MobiDBLite consensus disorder prediction 370 438 - -
Acco02g1948 466 Pfam RhoGAP domain 129 263 IPR000198 GO:0007165
Acco02g1948 466 Gene3D CRIB domain 61 98 IPR036936 -
Acco02g1948 466 MobiDBLite consensus disorder prediction 295 309 - -
Acco02g1948 466 FunFam Rho GTPase-activating protein 5 97 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1948 Acco-ChrAcco02 15616231 15618531 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1948 02 15616231 15618531 Acco06g0496 06 3068442 3070628 CCT
Acco02g1948 02 15616231 15618531 Acco02g1948 02 15616231 15618531 ECH