Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0195 ATGACAGTGAAATCTTGCTTGCTTTCTGATGCTTTTCTTTTTGCCCTGCTTAGTTTTCTTGCATTACCCGATGATATTTGGGGCCCTCCCTTCGCCATGGCTCATCCATCTGGCGGGAACCGACTTGCCATCATCTTCTTCCTCCCAGTCCATGCTACTTTATCTCGTGCAGCTCCGTCCTTCTTATCTCCATACTTAATCCTAGAATTAGGAATACTTCTCACCCTGATGGCACACGCTCCGCAAACCCTTGTGGCCACCGAATCAGAGCTCGATGAGCCTCCTCCTCCTCCAGGCCCTCTTTCTCCTCACTCCCCAAACCCTACTTCTCCTGAAGGCTTGATGAATCCAGATTCCACCCGAATCCCGACCCTCCTCCATATTTCCTTCAATCAGGATTCTGGCTGCTTCGCCGTGGGCACGGACCATGGTTTCCGGATCTACAATTGCGATCCGTTCCGCGAGATCTTTCGACGGGACTTTGGTGCAGGTGGTGGAATCGGTTTAGTTCAGATGTTGTTTCGTTGCAACATACTCGCCTTTGTTGGTGGCGGAACTGACCCTATTTACCCAAGTAACAAAGTAATGATTTGGGATGATCATCAGTCCCGGTGTATCGGCGAGCTATCGTTTCGATCCGAGGTCAAAGGGGTTCGTCTTAGAAGGGACCGAATTGTGGTGGTTCTGGTGCATAAGATATTCGTATATAATTTCGCAGATCTTAAGTTGTTGCACCAAATTGAGACAACGGCCAACCCAAAGGGACTTTGTGAGGTTTCGCACGTTTCAGGGACAATGGTGTTGGTCTGTCCAGGGTTGCAGAAGGGTCAGGTGAGGGTCGAACATTACGCCTCAAAGCGGACCAAGTTTATAATGGCGCACGATTCTAGAATAGCTTGCTTCGCGCTTACGCAGGATGGGCGGTTGCTAGCCACAGCCAGCAGCAAGGGGACTCTGGTCAGGATTTTCAATACATTGGATGGTTCATTGCTCCAAGAGGTAAGGAGAGGTGCAGACCGAGCAGAGATATACAGCCTGGCCTTTTCTGCTACTGCACAGTGGCTAGCTGTCTCGAGTGATAAAGGAACTGTTCATGTCTTCAACTTGAAGGTTGATTCAGGACTATTGGGGATTGAGAGAGTACAGAGTGCAACTGAATCTAATCCTGCTAACCCATCAGCCGCGTCATCTCTTTCATTTATAAAAGGTGTTCTGCCCAAGTATTTTAGCTCAGAATGGTCTGTGGCTCAGTTTCGCTTGCATGAAGGTTTGCAACATATTATTGCCTTTGGCCATCTGAAGAACACAATTGTAATACTTGGGATGGATGGAAGCTTTTATCGATGCCAGTTTGATCCGGTCAATGGTGGAGAGATGAGCCAAGTTGAATATCATAACTTCTTGAAGCCAGGAGAAATATTCTAG 1425 0.4807 MTVKSCLLSDAFLFALLSFLALPDDIWGPPFAMAHPSGGNRLAIIFFLPVHATLSRAAPSFLSPYLILELGILLTLMAHAPQTLVATESELDEPPPPPGPLSPHSPNPTSPEGLMNPDSTRIPTLLHISFNQDSGCFAVGTDHGFRIYNCDPFREIFRRDFGAGGGIGLVQMLFRCNILAFVGGGTDPIYPSNKVMIWDDHQSRCIGELSFRSEVKGVRLRRDRIVVVLVHKIFVYNFADLKLLHQIETTANPKGLCEVSHVSGTMVLVCPGLQKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGRLLATASSKGTLVRIFNTLDGSLLQEVRRGADRAEIYSLAFSATAQWLAVSSDKGTVHVFNLKVDSGLLGIERVQSATESNPANPSAASSLSFIKGVLPKYFSSEWSVAQFRLHEGLQHIIAFGHLKNTIVILGMDGSFYRCQFDPVNGGEMSQVEYHNFLKPGEIF 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0195 474 MobiDBLite consensus disorder prediction 88 117 - -
Acco06g0195 474 MobiDBLite consensus disorder prediction 91 107 - -
Acco06g0195 474 Gene3D - 119 453 IPR015943 GO:0005515
Acco06g0195 474 FunFam Autophagy-related protein 18a isoform A 123 453 - -
Acco06g0195 474 SMART WD40_4 284 324 IPR001680 GO:0005515
Acco06g0195 474 SMART WD40_4 115 149 IPR001680 GO:0005515
Acco06g0195 474 SMART WD40_4 327 368 IPR001680 GO:0005515
Acco06g0195 474 Pfam WD domain, G-beta repeat 337 368 IPR001680 GO:0005515
Acco06g0195 474 PANTHER WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED 123 467 - -
Acco06g0195 474 SUPERFAMILY WD40 repeat-like 123 370 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0195 Acco-ChrAcco06 1334693 1339663 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1895 02 15101245 15103446 Acco06g0195 06 1334693 1339663 CCT
Acco06g0195 06 1334693 1339663 Acco06g0195 06 1334693 1339663 ECH
Acco02g0515 02 3658450 3661298 Acco06g0195 06 1334693 1339663 ECH