Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0515 ATGGCTACCGTCTCTACTACTACCAGCTCTTCCCCTCCATGGACATGCCCTAACCCTAATTCTGATCTTAACCCCGAATTTCATGAAGACCAGTCACAAACCCTTGACTTGGATTCCACAATCCATCGCCAATCAACCCTACCTCACCAAGTATCCTCTCAGCTAAGTCCCCCTAACAGTCCACCAAAGTCTCATGCTCCAATGAACCCGACTCTGCTTCAGCTCTCTTTCAACCAAGATCAAGCTTGCTTCGCCACCGCCACTGACAACGGGTTTCGCATCTACAATTGCGACCCATTTCGGGAGCTCTTCCGCAGAGAATTTGATGGAGGCGATGGCATTACTGGGGGGATTGGTCAAGTGGAAATGCTCTTTCGTTATAATATGCTGGCACTGGTTGGAGGTGGCACCCATCCTCAATATCCTCCCACCAAGGTGATGATCTGGGATGATCATCAAGGCAGGTGCATTGGTGAGCTTTCGTTCCGATCAGCTATTCGTGGTGTCCGGCTTCGACGAGACCGAATAATTGTAGTTGTGGAGCAGAAGATTTTTGTGTACAATTTCGCTGACTTTAAGTTACTTCATCAAATTGAGACCGTTGCAAACCCGAAGGGGCTCTGTGCAGTTTCGCAATCGGCTGATTCTATGATATTGGCGTGTCCCGGTTTGCATAAGGGTCAGATACGAGTTGAGCATTATGCACAGAGAAAAACCAAATTCATTTCGGCGCATGATTCAAGAATAGCTTGTTTCACTCTTACTCTTGATGGGCAGTTACTCGCCACCGCCAGTACCAAGGGTACTTTAATTCGAATTTTTGATACAGCCAATGGCACGCTGCTTCAAGAGGTAAGAAGGGGCGCGCATGTGGCAGAGGTCTATAGTTTGGCGTTCTCTTCTACTGCTCAGTGGCTAGCAGTCTCGAGTGACAAGGGTACTGTCCACGTTTTCAGCCTTAAGGCTAACTCTAGTTCTGCTCAGCATGAAAATTCACAGATTGCAGCTGATTCGCATGCTGCCAGTACACCATCTAGCTCACCCCGTGGATTTGTTAAATTTAAAGGAGTATTACCGAAGTATTTTAATTCGAAGTGGTCACTTGCTCAGTTTCGCTTACATGAGGGCACTTGTTACACTGTCGCATTTGGTCAGCAAAAGAATACAGTCATAATTCTTGGCATGGATGGGAGCTTCTACCGGTGTCAGTTTGATCCAGAGCATGGTGGTGAGATGAATAAACTGGAATATCAGAACTTCTTAATGCCAGAGACAGCCTCGTGA 1284 0.4704 MATVSTTTSSSPPWTCPNPNSDLNPEFHEDQSQTLDLDSTIHRQSTLPHQVSSQLSPPNSPPKSHAPMNPTLLQLSFNQDQACFATATDNGFRIYNCDPFRELFRREFDGGDGITGGIGQVEMLFRYNMLALVGGGTHPQYPPTKVMIWDDHQGRCIGELSFRSAIRGVRLRRDRIIVVVEQKIFVYNFADFKLLHQIETVANPKGLCAVSQSADSMILACPGLHKGQIRVEHYAQRKTKFISAHDSRIACFTLTLDGQLLATASTKGTLIRIFDTANGTLLQEVRRGAHVAEVYSLAFSSTAQWLAVSSDKGTVHVFSLKANSSSAQHENSQIAADSHAASTPSSSPRGFVKFKGVLPKYFNSKWSLAQFRLHEGTCYTVAFGQQKNTVIILGMDGSFYRCQFDPEHGGEMNKLEYQNFLMPETAS 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0515 427 Gene3D - 70 413 IPR015943 GO:0005515
Acco02g0515 427 Pfam WD domain, G-beta repeat 289 318 IPR001680 GO:0005515
Acco02g0515 427 MobiDBLite consensus disorder prediction 1 70 - -
Acco02g0515 427 PANTHER WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED 68 420 - -
Acco02g0515 427 SMART WD40_4 278 319 IPR001680 GO:0005515
Acco02g0515 427 SMART WD40_4 364 403 IPR001680 GO:0005515
Acco02g0515 427 SMART WD40_4 235 275 IPR001680 GO:0005515
Acco02g0515 427 SMART WD40_4 58 96 IPR001680 GO:0005515
Acco02g0515 427 SUPERFAMILY WD40 repeat-like 61 403 IPR036322 GO:0005515
Acco02g0515 427 MobiDBLite consensus disorder prediction 1 28 - -
Acco02g0515 427 MobiDBLite consensus disorder prediction 37 59 - -
Acco02g0515 427 FunFam Autophagy-related protein 18a isoform A 70 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0515 Acco-ChrAcco02 3658450 3661298 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g0515 02 3658450 3661298 Acco02g0515 02 3658450 3661298 ECH
Acco02g0515 02 3658450 3661298 Acco06g0195 06 1334693 1339663 ECH