Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2761 ATGTGTTCCCTAAGCCGGAATGACTTGCAGAGGATTTTTGAGAAGCTGGAAAAGGAGGAGGATGGTTATGTTAGCCTTGAAAACCTAAAGAGACTAATGGAGAATATAGGTTTCAGTTTTGGAGCAGAGGAGGTTGAATGTCTTGTGGGGAAGAAGAGCCTTAACTTGGATGAGTTCTTGACGTTTTGCGAGTCCATGTCGAGTAGCAGTAATAGCAGTGGAGAGAACAGAGGAGGTCAAGATCAAGAAGAGAGAGAGCTGGTGAAGGCATTCGAGGTGTTTGACATGGACGGAGATGGATTCATCAGCAGCCAGGAGGTGGAGAGTGTGCTCAAGAGGCTTGGCTTGTGGGACCCCAAGAGCTGCAGGGATTGCGCCTCCATGATCGGCGTTTATGACTCCAATTCCGATGGCCTCCTTGATTTCCAGGAATTTAAGAACATGATGCTCCTTACCATCCCTTGA 465 0.4774 MCSLSRNDLQRIFEKLEKEEDGYVSLENLKRLMENIGFSFGAEEVECLVGKKSLNLDEFLTFCESMSSSSNSSGENRGGQDQEERELVKAFEVFDMDGDGFISSQEVESVLKRLGLWDPKSCRDCASMIGVYDSNSDGLLDFQEFKNMMLLTIP 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2761 154 ProSitePatterns EF-hand calcium-binding domain. 133 145 IPR018247 -
Acco05g2761 154 Gene3D - 5 67 - -
Acco05g2761 154 CDD EFh 86 149 IPR002048 GO:0005509
Acco05g2761 154 ProSitePatterns EF-hand calcium-binding domain. 95 107 IPR018247 -
Acco05g2761 154 Pfam EF-hand domain pair 86 149 IPR002048 GO:0005509
Acco05g2761 154 SMART efh_1 124 152 IPR002048 GO:0005509
Acco05g2761 154 SMART efh_1 8 36 IPR002048 GO:0005509
Acco05g2761 154 SMART efh_1 86 114 IPR002048 GO:0005509
Acco05g2761 154 SUPERFAMILY EF-hand 5 151 IPR011992 -
Acco05g2761 154 Gene3D - 68 150 - -
Acco05g2761 154 ProSiteProfiles EF-hand calcium-binding domain profile. 120 154 IPR002048 GO:0005509
Acco05g2761 154 ProSiteProfiles EF-hand calcium-binding domain profile. 82 117 IPR002048 GO:0005509
Acco05g2761 154 PANTHER CALCIUM BINDING PROTEIN 54 149 - -
Acco05g2761 154 ProSiteProfiles EF-hand calcium-binding domain profile. 4 39 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2761 Acco-ChrAcco05 42855966 42856430 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2761 2 150 EF-hand Containing Proteins AT1G21550 42.384 2.85e-37 123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g2761 05 42855966 42856430 Acco10g2440 10 35892463 35892969 CCT
Acco05g2761 05 42855966 42856430 Acco05g2761 05 42855966 42856430 ECH