Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2482 ATGGGAATGAAGAAGTTCTTAGTTGTTTCTATCTTACTAGCACTGGTTCTTGGTATTGCAGAGAGCTTTGATTTGTACGAGAAAGATTTGGAATCTGAGGAAAATTTGTGGGACTTGTACGAGAGATGGAGGAGCCATCACACTGTTTCTAGAAGCCTAAGTGAGAAACACAAGAGATTCAATGTGTTCAAAGCCAATGCGATGCATGTTCATAACACCAACAAGATGGACAAGCCTTACAAGCTCAAGTTGAACCGGTTCGCCGACATGACCAACCTTGAGTTCCAGAATACCTACGCTTCCTCAAAGATCAACCACCACAGAATGTTCCGTGGCACGCCACGTGGTGGGAATGGAACCTTCATGTACGAGAAAGTTGATAGAGTTCCTCCTTCAGTTGATTGGAGGAAGAAAGGTGCTGTCACTGCTGTAAAGGATCAAGGCCAATGTGGTAGTTGCTGGGCATTTTCAGCTGTTGCAGCTGTGGAAGGTATTAATCAGATAAAAACAAAGAAGCTAGTCTCATTGTCTGAGCAAGAGTTGGTAGACTGTGACACTGAACTAAATGAAGGATGCAATGGAGGGCTAATGGAATATGCTTATGAGTTCATCAAGCGAATTGGGGGGTTAACAACAGAAAGCAATTATCCCTATAAAGCCATAGATGAAACCTGCGATGTCTCAGAGGAGAAGCATCCATTAGTGTCAATTGATGGTCATGAGAATGTCCCTCCAAATGATGAAAACTCATTGCTCAAAGCTGCAGCAAACCAGCCTGTGTCTGTAGCCATAGATGCTTCCGGATCTGATTTCCAATTCTACTCAGAGGGAGTATTTACTGGAGATTGTGGGAAACAACTGAATCATGGGGTAGCTATTGTGGGATATGGAACAACTATTGATGGAACAAAATATTGGATAGTTAAGAATTCTTGGTGTACTGAATGGGGAGAGCAAGGTCACATCAGGATGCAGAGGGCTTTGCACCAGAAGGAAGGACTTTGTGGCATAGCAATGGAAGCTTCTTATCCAATCAAAAACTCCTCCACTAACCCAGGAGGACACCAATCATCTCATAAAGACGAGCTTTAA 1092 0.4322 MGMKKFLVVSILLALVLGIAESFDLYEKDLESEENLWDLYERWRSHHTVSRSLSEKHKRFNVFKANAMHVHNTNKMDKPYKLKLNRFADMTNLEFQNTYASSKINHHRMFRGTPRGGNGTFMYEKVDRVPPSVDWRKKGAVTAVKDQGQCGSCWAFSAVAAVEGINQIKTKKLVSLSEQELVDCDTELNEGCNGGLMEYAYEFIKRIGGLTTESNYPYKAIDETCDVSEEKHPLVSIDGHENVPPNDENSLLKAAANQPVSVAIDASGSDFQFYSEGVFTGDCGKQLNHGVAIVGYGTTIDGTKYWIVKNSWCTEWGEQGHIRMQRALHQKEGLCGIAMEASYPIKNSSTNPGGHQSSHKDEL 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2482 363 SUPERFAMILY Cysteine proteinases 35 346 IPR038765 -
Acco04g2482 363 Pfam Cathepsin propeptide inhibitor domain (I29) 40 95 IPR013201 -
Acco04g2482 363 CDD Peptidase_C1A 130 344 IPR039417 -
Acco04g2482 363 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 32 343 IPR013128 GO:0008234
Acco04g2482 363 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 147 158 IPR000169 -
Acco04g2482 363 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 287 297 IPR025660 -
Acco04g2482 363 Gene3D Cysteine proteinases 16 347 - -
Acco04g2482 363 Pfam Papain family cysteine protease 129 345 IPR000668 GO:0006508|GO:0008234
Acco04g2482 363 SMART Inhibitor_I29_2 40 95 IPR013201 -
Acco04g2482 363 FunFam Senescence-specific cysteine protease SAG39 20 346 - -
Acco04g2482 363 SMART pept_c1 129 345 IPR000668 GO:0006508|GO:0008234
Acco04g2482 363 PRINTS Papain cysteine protease (C1) family signature 289 299 IPR000668 GO:0006508|GO:0008234
Acco04g2482 363 PRINTS Papain cysteine protease (C1) family signature 305 311 IPR000668 GO:0006508|GO:0008234
Acco04g2482 363 PRINTS Papain cysteine protease (C1) family signature 147 162 IPR000668 GO:0006508|GO:0008234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2482 Acco-ChrAcco04 41613197 41615881 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g2482 04 41613197 41615881 Acco13g0533 13 3852371 3853768 CCT
Acco04g2482 04 41613197 41615881 Acco04g2482 04 41613197 41615881 ECH