Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g0139 ATGTCTGGTCAGGGAGGAGTCTCGATCAGCCGGAGCCGCAACGGCCACCGATTCTACGACCCTCCCGCCGTGAGAAGAAATCAACAGCAGCAACAGCAGCAACAGCAGCAGCAGCAGCAACAGCAGCAGCATCAGCATCAGCAACAGCAGCAGCAGCAGCAGATGGTGCATCGGCAACAGGTCCAGAAGCCGTTGAAGCACAAGGCTGCAGCCGAGCCGGAGAGCAGAACCGAGCTCGATGATTGCTCATCAACGTGTTCGGTTTCTCACCAGGGACTCGGCGATTCCACCAATTTGGATCGGTTCTTGGAGTACACCACTCCGGTGGTTCCGGCGCAGCACTTCCCCAAGACGAGCATGAGGGGATGGAGAAATCATCAAACAGAGTTTCATCCATACTTCATCCTTGGGGACTTATGGGAATCGTTCAAGGAGTGGAGTGCATATGGAGCGGGAGTTCCTCTTTTGTTGAATGGAAGTGAATCCGTTGTGCAGTACTATGTGCCTTACTTGTCTGGCATTCAACTTTATATAGACCCATCAAAGCCCTCCCCCAGGCTAAGGCGACCTGGTGAAGAGAGTGATGCAGAATCATCCAGGGAAACAAGTAGTGACGGCAGTGCTGATTATGGAGTAGAAAGAGGTGCCAATAGTGTTGCTCAGGGGCCTTGGAGCCAACAGAAACTTGCAGATGTGAATACCCAGAATATGAATAGACTCTCTCTGAGAAATAAACCCTTCATGGGTTCACCAAGTGGTGAGGGCGAGGTTTCCAACCCTCCAGGTTTACTTTTGTTTGAGTACTTGGAGCAGGATTCCCCATATGGTCGAGAACCTTTGGCTGATAAGATATCAGTTCTTGCATCTAAGTTTCCAGAACTAAGGACATACAGAAGCTGTGATCTATTGCCTTCAAGTTGGGTTTCTGTGGCTTGGTACCCCATTTATAGGATACCCATGGGTCCAACTCTACAGAATCTGGACGCCTGCTTCTTAACATTTCATTCCCTGTCAACACCCTTCCAAAGTTGTGATAGAATTTCCATCTTGTTTGAGACAGGTGCAAACACTGATTGGCTGGATTTTCGTGGGTCAAGTGTTCAGGAGGTCCATGGTGCTGGCATGCCCTTCAAGCTGTCATTATCCATCCTTGGGCTTGCTTTCTACAAGTTCAAAGTTTCTGTTTGGAATCACAATGGAGTCAATGAATGTCCAAAGGCCAATTCTCTATTGCGAGCTGCTGATAATTGGCTCAGAAGTTTGCAAGTTAATCATCCTGACTACCAGTTCTTTGTGTCCCACAATTCATATAGGAGGTGA 1320 0.4871 MSGQGGVSISRSRNGHRFYDPPAVRRNQQQQQQQQQQQQQQQQHQHQQQQQQQQMVHRQQVQKPLKHKAAAEPESRTELDDCSSTCSVSHQGLGDSTNLDRFLEYTTPVVPAQHFPKTSMRGWRNHQTEFHPYFILGDLWESFKEWSAYGAGVPLLLNGSESVVQYYVPYLSGIQLYIDPSKPSPRLRRPGEESDAESSRETSSDGSADYGVERGANSVAQGPWSQQKLADVNTQNMNRLSLRNKPFMGSPSGEGEVSNPPGLLLFEYLEQDSPYGREPLADKISVLASKFPELRTYRSCDLLPSSWVSVAWYPIYRIPMGPTLQNLDACFLTFHSLSTPFQSCDRISILFETGANTDWLDFRGSSVQEVHGAGMPFKLSLSILGLAFYKFKVSVWNHNGVNECPKANSLLRAADNWLRSLQVNHPDYQFFVSHNSYRR* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g0139 439 MobiDBLite consensus disorder prediction 185 202 - -
Vvi5g0139 439 Pfam Protein of unknown function (DUF789) 97 431 IPR008507 -
Vvi5g0139 439 MobiDBLite consensus disorder prediction 65 79 - -
Vvi5g0139 439 MobiDBLite consensus disorder prediction 1 93 - -
Vvi5g0139 439 SUPERFAMILY beta-sandwich domain of Sec23/24 19 67 - -
Vvi5g0139 439 Coils Coil 25 52 - -
Vvi5g0139 439 PANTHER T15D22.8 21 435 - -
Vvi5g0139 439 MobiDBLite consensus disorder prediction 181 213 - -
Vvi5g0139 439 MobiDBLite consensus disorder prediction 24 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g0139 Vvi-Chr5 1204586 1223679 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g0139 - - vvi:100258588 847.81