Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g0138 ATGGACTCCGATTTCGCCGCTCGTTTCTCTATTCTGTCAAAGCGTTTTCAGTCTCGATCTGATCTGTATCTGGAGAGAGGCGGAGAGGAGTTTGACGGCGATGAGGAGTGTTTGCCGGAGTTTCTTTGCCCGTTTTGTGCTGAGGATTTCGACGTGGTTGGACTTTGTTGCCATATAGATGAGGAGCATCCCGTTGAAGCAAAAAATGGGGTATGTCCAGTTTGTGCGAAAAGAGTGGGGATGGATATTGTTAGCCATATTACAATGCAACATGGAAATTTCTTTAAAGTGCAGCGGAGGAGGAGATTCCGCAGGGGTGGGTCCAACTCAACATTTTCTATATTGAGGAAAGAGCTGCGGGATGGAAATCTGCAATCTATTTTTGGGGGTTCTTCACGCATAGTTTCTTCCTCCAATTCAGAACCTGATCCATTGTTGTCATCATTTATGTATAATGCGCCTGTAGTTGTTGAACCTGTTGTTGTACAACCTGATTCTTCCGCTGAAGCAAGTGTGGTAAAGGAGAGCTCAGATGAGGGTTTCTCAGAAAGAAACATCCAAAAGCCTCAACTATCAGATAAAGAGCAAGAGGAGAAGGCTAGGAGGTGTGAGTTCGTCCAAGGGCTTTTGCTGTCAACTATTCTTGAAGACAGCTTATGA 660 0.45 MDSDFAARFSILSKRFQSRSDLYLERGGEEFDGDEECLPEFLCPFCAEDFDVVGLCCHIDEEHPVEAKNGVCPVCAKRVGMDIVSHITMQHGNFFKVQRRRRFRRGGSNSTFSILRKELRDGNLQSIFGGSSRIVSSSNSEPDPLLSSFMYNAPVVVEPVVVQPDSSAEASVVKESSDEGFSERNIQKPQLSDKEQEEKARRCEFVQGLLLSTILEDSL* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g0138 219 Pfam Stress-induced protein Di19, C-terminal 113 214 IPR027935 -
Vvi5g0138 219 MobiDBLite consensus disorder prediction 176 197 - -
Vvi5g0138 219 MobiDBLite consensus disorder prediction 168 197 - -
Vvi5g0138 219 PANTHER PROTEIN DEHYDRATION-INDUCED 19 29 216 IPR033347 -
Vvi5g0138 219 Pfam Drought induced 19 protein (Di19), zinc-binding 40 92 IPR008598 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g0138 Vvi-Chr5 1198665 1202899 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g0138 - - vvi:100241400 410.609