Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g0137 ATGTATTCATGCTTATATTCAATCTACCCAACAATCCAAATCTTCTCTAGCAAATTCAGTTGTTTCCATTCCGCGGAGATTCCAAATCCAAGTTTATTGGATCCAATAATTGAAGCTTCTCGAGGTAGTTTTAGTAGGGCATGGATTTCACGACCTATAACACCAAGAATTGTAGAAAAAGATACAGGGAGCAGTAAATCAAGCCACCCCTGGCATGAATCATTGGAAGCAAGTTTGAGAGCAAGAAGTATAAGTGAATCATCATGCAGTGAATTCAGAAGAATTCAGTACTTTGATGCTGAACAGAGGATTAAGGAGAGCCAAGACTTGAAGCATCCAGTAAAAAGTTTTGTTATTGATGTTGAAACTACTGGATTTTGCAGGGCGACTGGCTGGATTATTGAAATTGCTATCCTGGATCTTCTAAGGGACAAGAACAGTTGTTTCCAAGCCCTCATAAAACCAGAACAGCATGTTCCAAATTCTTTTCTGCTTGGTATTACAACCCAGATGGTTAATGAACTGAATGTTCCAAGGTCCTCCCCGTTTTATTCAACTTGTGATCCATTCCCTTGTTTAGGAACTGTGAAGAAATACACTGCTATGCCTGGAAGGAGATCACTGATGGCAGTTTGCCTTAGTTTGGATTCCCTCAACTGTGGGATCCTTTGTGCTTTCTTGCTCCTCATGCTTCAATAG 699 0.402 MYSCLYSIYPTIQIFSSKFSCFHSAEIPNPSLLDPIIEASRGSFSRAWISRPITPRIVEKDTGSSKSSHPWHESLEASLRARSISESSCSEFRRIQYFDAEQRIKESQDLKHPVKSFVIDVETTGFCRATGWIIEIAILDLLRDKNSCFQALIKPEQHVPNSFLLGITTQMVNELNVPRSSPFYSTCDPFPCLGTVKKYTAMPGRRSLMAVCLSLDSLNCGILCAFLLLMLQ* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g0137 232 PANTHER THREE PRIME REPAIR EXONUCLEASE 1, 2 49 181 IPR040393 GO:0008408
Vvi5g0137 232 Gene3D - 112 188 IPR036397 GO:0003676
Vvi5g0137 232 SUPERFAMILY Ribonuclease H-like 117 174 IPR012337 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g0137 - - dzi:111307501 127.487