Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g0134 ATGGAGAGGCCCCGTAGAGTTAGAATGCTACTTTTCGTGGCGGTTTTCATGGTGGTGCAGAGGCAATCCTGGCCGGCCACGGCGGATGTCGCGGCGAAGTCCAAGTACCAGATCGAGTGCACAATGTGCTCTGCTTGTGACAACCCATGCAACCAAGTGCCGTCGCCCCCACCGCCGAATCCCTCTCCCCCGCCTCCGTCGCCTCCACCGCCGTCGTCGAGCTCCAACTGCCCGCCACCGCCTTCCCCGCCCAGCAATCCTACTTACTACTACTCCCCGCCGCCCCCCTCGCAGCCCACCTACGTGTACTCCTCTCCTCCGCCGCCCAATGGCTACAACGGAGGCGGCGGTGGCGGTGGAGCTTTCTATCCGCCGCCGTATCAGAACTACCCTGCACCGCCGCCCCCGAACCCCATCGTGCCGTACTTCCCGTTCTGGTACCACACCCCTCCGCCGACGTCGGCGGCCAACTCCGTCTACTTTTCGGACTCTACAGGGTTGTGA 504 0.6389 MERPRRVRMLLFVAVFMVVQRQSWPATADVAAKSKYQIECTMCSACDNPCNQVPSPPPPNPSPPPPSPPPPSSSSNCPPPPSPPSNPTYYYSPPPPSQPTYVYSSPPPPNGYNGGGGGGGAFYPPPYQNYPAPPPPNPIVPYFPFWYHTPPPTSAANSVYFSDSTGL* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g0134 167 PRINTS Proline rich extensin signature 47 59 - -
Vvi5g0134 167 PRINTS Proline rich extensin signature 59 80 - -
Vvi5g0134 167 PRINTS Proline rich extensin signature 92 108 - -
Vvi5g0134 167 PRINTS Proline rich extensin signature 121 138 - -
Vvi5g0134 167 MobiDBLite consensus disorder prediction 52 129 - -
Vvi5g0134 167 MobiDBLite consensus disorder prediction 52 106 - -
Vvi5g0134 167 PANTHER PROLINE-RICH FAMILY PROTEIN 8 158 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g0134 - - vvi:100248329 160.614