LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vvi5g0119	ATGGACTCAGAAACTTCTCATGGGTCAGTTGCACTTATCGTCGGCGTTACCGGCATGGTGGGCCTCAGCTTAGCCGAAGCCCTTAAGAAGCCCAGGGCCCTTGGAGGTCCTTGGAAGGTTTACGGCGCCGCTCGCCGCCCCAAGCCCACCTGGTTCCCCACCTCCAACGTCGACGATTACATAGCCTTCGACGCCGTTAATCCCGATGACACTCGTGCCAAGTTGTCTCCGATCTCCCACGAAGTCACGCACGTCTTCTGGGTGGCAATCCAAGTCCGCGAAACGGAGGAACTGAATGTCACCGTTAACGCCGCCATGCTCTCTAATGTACTTGGCGTCCTCAAATCGGTGCCGTCTTCACGGCTGCGACACCTCACCCTCCAAACCGGCACACAACACTACATCGGTCCGCTCCATGACCCCAACCACTCGGGCCAACTGCCATGTCCAGAAACTCCGTTTCGTGAGGACTCGGCCCGCCTCCCATTCCCGAACTTCTACTACGCGCTTGAAGACCTCATAGCTTCCTACTCGCCGTCCCTCTCCTACTCGATTCACCGGTCTTCCATCATCCTCGGCGCGTCTTCACGGAGCGCGTACAACGCACTGCTCACACTGGCAGCCTATGCTGCCATATGTAAACACGAAAGCTTGCCGTTTCGGTATCCCGGCACCCGATACACGTGGGAGCATTTCTGCGACATGTCGGACGCGCGTTTACTGGCGGAGCAGCAGATATGGGCAGGGGTTTCGGAGAAGGCAAAGAACCAAGCGTTCAACTGCGTGAACGGCGACGTTTTTACTTGGAAGAGCATGTGGAAGGTAGTGTGCGAGGTGTTTGATGTTGAGTTTGTGGAATTTGATGAGTCCCAAGAGTTTGATTTTGTGGGGATGATGAGTGGAAAAGGAAAAGTTTGGGAGAGTATAGTGAAAAAGTATGGGCTTTACGAGACGAAATTGGAGGAGATCACTTGTTTTGCAGCTCTGAAAACGGTTTTGCATATGGAATTTCAGCATGTGTGTAGCATGAACAAGAGTCGCAATTTTGGGTGGTTTGGCCATGTGGATACACTGCAGAGTGTTGGAACCTGGGTGGAGAGATTGAGAGTGATGAAGATAATACCCGCAACAACAGACTGA	1140	0.5333	MDSETSHGSVALIVGVTGMVGLSLAEALKKPRALGGPWKVYGAARRPKPTWFPTSNVDDYIAFDAVNPDDTRAKLSPISHEVTHVFWVAIQVRETEELNVTVNAAMLSNVLGVLKSVPSSRLRHLTLQTGTQHYIGPLHDPNHSGQLPCPETPFREDSARLPFPNFYYALEDLIASYSPSLSYSIHRSSIILGASSRSAYNALLTLAAYAAICKHESLPFRYPGTRYTWEHFCDMSDARLLAEQQIWAGVSEKAKNQAFNCVNGDVFTWKSMWKVVCEVFDVEFVEFDESQEFDFVGMMSGKGKVWESIVKKYGLYETKLEEITCFAALKTVLHMEFQHVCSMNKSRNFGWFGHVDTLQSVGTWVERLRVMKIIPATTD*	380

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vvi5g0119	379	PANTHER	3-OXO-DELTA(4,5)-STEROID 5-BETA-REDUCTASE	4	375	-	-
	Vvi5g0119	379	Gene3D	-	9	375	-	-
	Vvi5g0119	379	SUPERFAMILY	NAD(P)-binding Rossmann-fold domains	9	359	IPR036291	-
	Vvi5g0119	379	CDD	5beta-POR_like_SDR_a	10	314	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vvi5g0119	Vvi-Chr5	1071869	1073008	Tandem

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vvi5g0119	-		-	vvi:100265432	744.962