Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g0118 ATGGAGCTAGATCAGATTCCTCACGCATCAGTCGCGCTGATCGTCGGCGTCACCGGCATGGCCGGCTTGAGCTTGGCCGAAGCACTCAAGAAGCCTAGTGCCTCAGGCAGCCCATGGAAAGTCTACGGCGCCGCCCGCCGCCCCCAGCCCACCTGGTTCCCCATCTCCATCGTCGACCACTACATGACATTCGACGCCGTTTGTTCCGACGACACGCGGGCCAAGCTCTCTCCGATTTCGAACGAAGTCACGCACGTATTCTGGGTGGCCATCCAAGTCCGCGAAACGGAGGAACTCAACATCACCGTCAACGCCGCCATGCTGTCCAACGTACTCGAAGTTTTCAAATCGGCGCCGTCATCACGCCTCCAACACGTGACTCTTCAGACCGGTACCAAACATTACATGGGCCCGATATTCTACCCGGAAAAATCGAAACAGCTCACCGCACCGGAGACCCCATTTCGGGAGGATTTCCCTCGACTTCCATTCCCGAACTTCTACTACGCGCTCGAAGACCTACTAGCTTCGCACACACCCTCCTTCACCTACTCCGTTCACCGATCATCAATCATCATCGGCGCGTCTTCAAGGAGCACGTATAACGCGCTGCTCACACTCGCAGTTTATGCAGCCATATGTAAACACGAAGGCTTGCCGTTTCGGTATCCAGGCACCCGGTACACTTGGGATCATTTCTGCGACATGTCGGACGCGCGTGTGCTGGCGGAGCAGCAGATATGGGCGGCGGTTTCTGAAAAGGCTAAGAACCAAGCGTTCAACTGCGTAAACGGCGACATTTTTACTTGGAAGAGCATGTGGAAGGTAGTGTGCGAGGTGTTTGAGGTTGAGTTTGTGGAATTTGATGAGTCCCAGGAGTTTGATTTTGTGGGGATGATGAGTGAGAAAGGAAAAGTTTGGGAGAGCATTGTGAAAAAACATGGACTGTACGAGAGCAAATTAGAGGAGATCACTTGTTTTGCAGCGCTGAAAGCAGTTCTGCATTTCGAATTTCAGCATGTATGCAGCATGAACAAAAGTCGCAGTTTCGGGTGGTTTGGCCATGTGGATACGCTGCAGAGCATAGGCATATGGGTGGAGAGATTGAGAGTGATGAATATAATACCCTAA 1131 0.527 MELDQIPHASVALIVGVTGMAGLSLAEALKKPSASGSPWKVYGAARRPQPTWFPISIVDHYMTFDAVCSDDTRAKLSPISNEVTHVFWVAIQVRETEELNITVNAAMLSNVLEVFKSAPSSRLQHVTLQTGTKHYMGPIFYPEKSKQLTAPETPFREDFPRLPFPNFYYALEDLLASHTPSFTYSVHRSSIIIGASSRSTYNALLTLAVYAAICKHEGLPFRYPGTRYTWDHFCDMSDARVLAEQQIWAAVSEKAKNQAFNCVNGDIFTWKSMWKVVCEVFEVEFVEFDESQEFDFVGMMSEKGKVWESIVKKHGLYESKLEEITCFAALKAVLHFEFQHVCSMNKSRSFGWFGHVDTLQSIGIWVERLRVMNIIP* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g0118 376 PANTHER 3-OXO-DELTA(4,5)-STEROID 5-BETA-REDUCTASE 8 376 - -
Vvi5g0118 376 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 308 IPR036291 -
Vvi5g0118 376 CDD 5beta-POR_like_SDR_a 11 315 - -
Vvi5g0118 376 Gene3D - 9 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g0118 Vvi-Chr5 1067582 1068712 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g0118 - - vvi:100260215 738.413