Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g0117 ATGGCGGATTGCAACAGGGGAGACGGCTTCTTTCCTTCTTCCCAAGATCACGAGGCAACATCCGAGGTGAAGAAATATGGAGGACTTGCGCCAAAGAAGAAGCCTCTGATTTCGAAGGATAATGAACGTGCCTTCTTTGATTCAGCAGACTGGGCATTATGCAAGCAAGGTGCAGGAATGAACCAAAAATCAACAGTGGCCGTAGAGACATTGCGCCCAAAGTTACAGAGAACGCCACACCAACGGCTCCCCCCTCGAAGACCTGCTTGTACTTCTGGCCGTGATAGCCTCGTGGAGTAG 300 0.51 MADCNRGDGFFPSSQDHEATSEVKKYGGLAPKKKPLISKDNERAFFDSADWALCKQGAGMNQKSTVAVETLRPKLQRTPHQRLPPRRPACTSGRDSLVE* 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g0117 99 Pfam cAMP-regulated phosphoprotein/endosulfine conserved region 13 90 IPR006760 -
Vvi5g0117 99 PANTHER CAMP-REGULATED PHOSPHOPROTEIN 19-RELATED PROTEIN 1 97 - -
Vvi5g0117 99 MobiDBLite consensus disorder prediction 1 34 - -
Vvi5g0117 99 MobiDBLite consensus disorder prediction 18 34 - -
Vvi5g0117 99 MobiDBLite consensus disorder prediction 72 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g0117 Vvi-Chr5 1058754 1062742 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g0117 - - vvi:100255126 208.379