Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g0115 ATGGTGGTGGAGCGCGACATAGATGATCTACCGAAGAACGCAGCGAACTACACGGCCTTGACTCCGCTGTGGTTGCTGGAGAGAGCGGCTGTGGTACATCCCAACAGGAAATCAGTGATCCATGGATCTTTGCAGTACACGTGGCTCCAGACTTATCAGCGGTGCCGCCGATTGGCTTCCGCTCTTTCTAAGTATTCCATCGGCGCCGGCAGTACGGTAGCAATAATTGCACCAAACATCCCTGCCAAGTATGAAGCTCATTTCGGGGTTCCCATGTCTGGAGCGGTGGTGAACTGTGTTAACATTCGTCTAAATGCACCGACAATTGCTTTCCTTCTTGAGCATTCATCGGCAGCAGTTGTAATGGTGGATCAAGAGTTTTTCCCATTGGCAGAGGAAGCTTTGAAAATCTGGTCAGACAAAAGCAAAAATGATTTTAAGCCTCCACTTCTAATCGTCATAGCTGATGAAAGCTGCGATCCTAAAGCACTAGAATATGCTTTGAGGAAAGGGGTCATTGAATATGAGCAGTTCCTGGAAACAGGAGACCCTGAATTTGCATGGAAACCACCACAGGATGAGTGGCAGAGTATTGCTTTGGGGTATACTTCTGGAACAACAGCCAGCCCTAAGGGGGTAGTGTTGCACCATAGGGGAGCATATATCATGGCCCTCACTGGTGCTCTTGTATGGGGGATGAATGAAGGAGCTGTGTACCTATGGACACTTCCAATGTTTCATTGTAATGGCTGGTGTTTCACTTGGACACTTGCTGCTCTTTGTGGGACCAACATATGCCTTCGGCAGGTTGAAACCAAGGCAATTTATCAAGCCATAGCCAACGATGGTGTAACCCACCTCTGTGCTGCACCAGTGGTCCTCAACAGCATAGTCAATGCCCCCAAAAGTGAAACCATCCTTCCCCTTCCACGCGTGGTCCATGTAATGACAGCTGGGGCTGCTCCGCCCCCTTCTGTTCTCTTTGCCATGTCCCAACAAGGCTTTCGAGTCACCCATACCTACGGACTCTCAGAAACCTACGGCCCCTCCACAGTATGTGCATGGAAACCTGAATGGGATGAACTACCACCTGAAACTCAAGCCCGTCTCAATGCACGCCAAGGCGTCCAATACATCGGCTTGGAGGGCCTAGATGTGGTCAGCACCACAGACATGAAGCCTGTCCCTGCCGATGGAACCACCATTGGTGAGATTGTGATGCGGGGTAATACTGTGATGAAGGGCTACTTAAAGAACCCGAAAGCCAACGAGGAAACTTTTGCAAATGGATGGTTTCATTCAGGTGATCTTGGGGTGAAGCATCCAGATGGGTACATACAACTTAAGGACCGATCAAAAGACATCATCATCTCTGGAGGCGAAAACATAAGCAGTGTGGAGGTTGAAAATGCTGTATACTTGCACCCTGCAGTGCTAGAGGCATCAGTGGTGGCAAGGCCAGATGACCGCTGGGGGGAATCACCTTGTGCTTTCGTGACGTTGAAGCCAGGGGTTGATAGATCCGATGAAAGACGCCTGGCAGAAGATATTATGAAGTTCTGCCGATCCAAGTTGCCGGCTTACTGGATTCCAAAATCTGTGGTGTTTGGACCATTGCCCAAGACGGCCACTGGGAAGATACAGAAGCATCTGCTGAGGGCCAGGACGAAGGAGATGGGACCTCTTAAGAAGAGCAAGCTGTAG 1704 0.4994 MVVERDIDDLPKNAANYTALTPLWLLERAAVVHPNRKSVIHGSLQYTWLQTYQRCRRLASALSKYSIGAGSTVAIIAPNIPAKYEAHFGVPMSGAVVNCVNIRLNAPTIAFLLEHSSAAVVMVDQEFFPLAEEALKIWSDKSKNDFKPPLLIVIADESCDPKALEYALRKGVIEYEQFLETGDPEFAWKPPQDEWQSIALGYTSGTTASPKGVVLHHRGAYIMALTGALVWGMNEGAVYLWTLPMFHCNGWCFTWTLAALCGTNICLRQVETKAIYQAIANDGVTHLCAAPVVLNSIVNAPKSETILPLPRVVHVMTAGAAPPPSVLFAMSQQGFRVTHTYGLSETYGPSTVCAWKPEWDELPPETQARLNARQGVQYIGLEGLDVVSTTDMKPVPADGTTIGEIVMRGNTVMKGYLKNPKANEETFANGWFHSGDLGVKHPDGYIQLKDRSKDIIISGGENISSVEVENAVYLHPAVLEASVVARPDDRWGESPCAFVTLKPGVDRSDERRLAEDIMKFCRSKLPAYWIPKSVVFGPLPKTATGKIQKHLLRARTKEMGPLKKSKL* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g0115 567 Gene3D - 6 453 IPR042099 -
Vvi5g0115 567 Gene3D - 454 560 IPR045851 -
Vvi5g0115 567 FunFam Long-chain-fatty-acid--CoA ligase FadD 7 453 - -
Vvi5g0115 567 SUPERFAMILY Acetyl-CoA synthetase-like 14 557 - -
Vvi5g0115 567 FunFam 2,3-dihydroxybenzoate-AMP ligase 453 560 - -
Vvi5g0115 567 Pfam AMP-binding enzyme C-terminal domain 467 546 IPR025110 -
Vvi5g0115 567 Pfam AMP-binding enzyme 26 458 IPR000873 -
Vvi5g0115 567 CDD ttLC_FACS_AEE21_like 17 554 - -
Vvi5g0115 567 PANTHER ACYL-ACTIVATING ENZYME 11 562 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g0115 Vvi-Chr5 1038935 1043206 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi5g0115 5 567 Miscellaneous Gene Families AT3G16910 76.909 0.0 930
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g0115 K01913 - vvi:100244843 1161.75