Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g0111 ATGCCAAGAGATATGGGGAGGATGGTGGATGCTGTGGTGTACCTGGTCGATGCGTATGACAAGGAAAGATTTGCTGAGTCAAAGAGGGAGTTGGATGCTCTCCTTTCTGATGAGTCACTGGCAAATGTTCCATTTCTCATTCTGGGAAACAAGATAGACATACCCTATGCTGCCTCTGAGGATGAGTTGCGTTACCACCTGGGCCTGACCAACTTCACGACTGGTAAGGGTAAGGTTAATCTGGTAGACTCAAATGTCCGCCCTCTCGAGGTGTTCATGTGCAGCATTGTTCGCAAAATGGGATATGGTGAAGGTTTCAAGTGGGTCTCTCAGTACATCAAGTAG 345 0.4783 MPRDMGRMVDAVVYLVDAYDKERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLVDSNVRPLEVFMCSIVRKMGYGEGFKWVSQYIK* 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g0111 114 Pfam ADP-ribosylation factor family 8 113 IPR006689 GO:0003924|GO:0005525
Vvi5g0111 114 PRINTS GTP-binding SAR1 protein signature 43 64 IPR006689 GO:0003924|GO:0005525
Vvi5g0111 114 PRINTS GTP-binding SAR1 protein signature 87 111 IPR006689 GO:0003924|GO:0005525
Vvi5g0111 114 PANTHER RE74312P 7 114 IPR006687 GO:0005525|GO:0006886
Vvi5g0111 114 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 113 IPR027417 -
Vvi5g0111 114 FunFam Ras-related small GTP-binding family protein 3 114 - -
Vvi5g0111 114 ProSiteProfiles small GTPase SAR1 family profile. 1 113 - -
Vvi5g0111 114 SMART sar_sub_1 1 113 IPR006689 GO:0003924|GO:0005525
Vvi5g0111 114 Gene3D - 1 114 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g0111 Vvi-Chr5 983719 984988 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g0111 K07953 - vvi:100256889 210.305