Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g0108 ATGGGCGCGCAGGAAAAATCCTCCGCCAGTTCCAATTCGATGCAGCGTGTTAAGGTCTACCGTCTGAATGACGATGGGAAATGGGATGACCAGGGAACTGGACACGTCAGTGTTGATTACATGGAGAGAACAGAAGAGTTGGGTTTGTTTGTAATTGATGAAGAAGACCACGAAACACTACTTTTGCATCGTATCAGCTCAGAGGATATATATCGAAAACAAGAAGAAACAATTATTTCATGGAGAGATCCTGAATATTCTACTGAATTAGCTCTTAGCTTTCAAGAGACTACCGGATGCTCTTTCATATGGGACCATATCTGCACTGTGCAAAGGAATCTCCAGTTTAATAATCTTAGCAGTGACTCATTTCACAGCATCAACAGTGAGTTGAGGGAGTTGCCTGCAGTTGAGCTGTCCACCCTTCCCTTGATACTGAAGATAGTGTTGGAGAGTGGCATTGCTGAGCAGATACGCCTGACTGAACTTATTTTAAACGATCAAGAATTTTTCCAAAAGCTGATGGACCTATTTAGGATATGCGAAGACTTGGAAAACATGGATGGCCTTCACATGATATACAAGATTGTCAAAGGGATCATTTTACTCAACAGTCCTCAGATATTTGAGAAATTATTTGGGGATGACTTGATCATGGATGTCATTGGGTCACTTGAGTATGATCCTGACATTCTCCATGCCCAACATCATCGTAATTTCCTAAAAGAGCATGTGGTTTTTAAGGAGGCTATACCAATCAAAGATCCCATGGTCCTGTCAAAGATACACCAGACTTACAGAGTTGGTTATTTGAAGGATGTCGTTTTGCCTAGAGTGCTGGATGAGGCTACAGTTGCAAATCTTAATTCCATAATTCATTCAAATAATGCCGTTGTTGTTTCTTTATTAAAGGAAGACAGCACCTTTATTCAAGAACTGTTTGTGAGGTTGAGATTATCAAGCACTTCTGCGGAATCTAAGAAAAATTTGGTATTTTTCTTATATGAGTTTTGTAGTTTAAGCAAGAGCTTGCAGATGGTCCAGCAGCTTCGGCTATTTAGGGATCTTGTGAATGAAGGCATCTTTGACATCGTATCTGATGCTTTGCAGAGTCAAGACAAGAGACTTGTATTGACTGGGACAGACATCCTCATTCTTTTCCTGAATCAGGATCCAAACCTTCTGCGTTCTTATGTCATTCGGCAGGAAGGAATTCCACTTCTTGGACTTCTGGTTAAAGGTATGATAACAGATTTTGGAGAGGACATGAATTGCCAGTTTCTTGAAATTCTACGCAGTTTACTAGATTCATACACATTGTCAGGATCACAGAGAGATACTATTATTGAGATATTCTATGAGAAGCATTTGGGTCAATTAATTGATGTTATTACATCATCATGCCCAAAGGAAGGCGGTGCACAATCAATCAGTAAATCTGCTGGCCCTGATGGAAAAGTTGAAAATCAGATCACCACAAAGCCTGAAATACTGTCAAACATTTGTGAACTGCTGTGCTTTTGTGTTTTGCACCATCCATATAGAATAAAGTGCAACTTTCTCCTCAATAATGTGATAGATAAAGTTCTGTTTCTAACTCGAAGAAGGGAAAAATATCTAGTAGTTGCTGCTGTTCGATTTGTTCGCACTATTCTTTCCCGCCATGATGAGCATCTGATAAACCATGTTATTAAGAACAACCTGCTTAAACCAGTTGTAGATGTCTTTGTTGCTAATGGCAATCGTTATAATCTGCTGAATTCTGCAGTTCTAGAACTTTTTGAGTATATCCGCAGGGATAACCTGAAACCATTGCTGAAATATTTATATGATTCCTTCTGGGATCAGTTGGTCAAATTTCAGGATTTGGCTTGCATTAAGACTCTAAAAGTTAAATATGAACAGACACTAGAGGATTGTGTGGCAAAAGGCACCATTAATGCAGTGGACAGTAGTAGAAAACGAATTGATGAGCGTGCTCTGGAGAAAGAAGAGGAAGACTACTTCAACGAGGACAGTGATGAAGAAGATACAGCATCTGCATGCGTGTCACATACCAATAAAGTACAAGCTCAACCTGTTTTGTCCAATGGGGTTGCTGCTAACTACCCATCGTTAAGTCCAAGATCTGGTGGACTGGTTGACTATGCGGATGATGAGGATGAGGAAGAGTACAGACCACCACCAAAGAAACAGCCAGAAAACCTGGATGGAGATGAAGGAGCATTGGAGTCCCTCAAGTTGAAACGGAAATTAGCTTCTAAGGAGAAGGAGCCTGAGCCGGCAAAGAAGGCACGATTGGCCAAAAATCCCAAGTCAAAAGATGGTGTATTTGCTGCTTTGTGTTCGACACTAAGTCAGGCAGTTCTACCCAATAAGAAAATAGCGAGCCCCATTCATATTACTCCTCGCACTACAGATGGAAACCAGAGCACAGATGAAGAAAAGCATCAAGAGGATGAACCCTTAAGTTTTAGAAGCTGTTCTGATAACAGCAGCAGTTCAGATGAGGAAAACCATAGAGAAAAAGAACCTGCTGCTTCGAGAAACTGTTCTGATTGCTTGCACAGCAGCTCGGACAATCGACAGTTAGGCGGAGAGGACTGTCCATTGATACCACCCAAATCCTCGCCTGAAATGGCTGTAAATGGTGCCTAA 2658 0.4108 MGAQEKSSASSNSMQRVKVYRLNDDGKWDDQGTGHVSVDYMERTEELGLFVIDEEDHETLLLHRISSEDIYRKQEETIISWRDPEYSTELALSFQETTGCSFIWDHICTVQRNLQFNNLSSDSFHSINSELRELPAVELSTLPLILKIVLESGIAEQIRLTELILNDQEFFQKLMDLFRICEDLENMDGLHMIYKIVKGIILLNSPQIFEKLFGDDLIMDVIGSLEYDPDILHAQHHRNFLKEHVVFKEAIPIKDPMVLSKIHQTYRVGYLKDVVLPRVLDEATVANLNSIIHSNNAVVVSLLKEDSTFIQELFVRLRLSSTSAESKKNLVFFLYEFCSLSKSLQMVQQLRLFRDLVNEGIFDIVSDALQSQDKRLVLTGTDILILFLNQDPNLLRSYVIRQEGIPLLGLLVKGMITDFGEDMNCQFLEILRSLLDSYTLSGSQRDTIIEIFYEKHLGQLIDVITSSCPKEGGAQSISKSAGPDGKVENQITTKPEILSNICELLCFCVLHHPYRIKCNFLLNNVIDKVLFLTRRREKYLVVAAVRFVRTILSRHDEHLINHVIKNNLLKPVVDVFVANGNRYNLLNSAVLELFEYIRRDNLKPLLKYLYDSFWDQLVKFQDLACIKTLKVKYEQTLEDCVAKGTINAVDSSRKRIDERALEKEEEDYFNEDSDEEDTASACVSHTNKVQAQPVLSNGVAANYPSLSPRSGGLVDYADDEDEEEYRPPPKKQPENLDGDEGALESLKLKRKLASKEKEPEPAKKARLAKNPKSKDGVFAALCSTLSQAVLPNKKIASPIHITPRTTDGNQSTDEEKHQEDEPLSFRSCSDNSSSSDEENHREKEPAASRNCSDCLHSSSDNRQLGGEDCPLIPPKSSPEMAVNGA* 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g0108 885 MobiDBLite consensus disorder prediction 833 849 - -
Vvi5g0108 885 MobiDBLite consensus disorder prediction 809 824 - -
Vvi5g0108 885 MobiDBLite consensus disorder prediction 792 885 - -
Vvi5g0108 885 MobiDBLite consensus disorder prediction 723 771 - -
Vvi5g0108 885 MobiDBLite consensus disorder prediction 700 772 - -
Vvi5g0108 885 SUPERFAMILY PH domain-like 15 110 - -
Vvi5g0108 885 Pfam Phosphatase 4 regulatory subunit 3 168 356 IPR006887 -
Vvi5g0108 885 PANTHER ATP SYNTHASE GAMMA-RELATED 16 794 - -
Vvi5g0108 885 SUPERFAMILY ARM repeat 283 599 IPR016024 -
Vvi5g0108 885 Gene3D - 279 660 IPR011989 -
Vvi5g0108 885 Gene3D - 10 130 IPR011993 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g0108 K17491 - vvi:100241492 1719.13