Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g0107 ATGAGCAGTAATCTAGAAACTCGATCTCTTCTGGACGAGCTTCGTGATTTCGACAAAGGCGGCTTCTTCGACCTCGGCCATCCTCTCCTCAACCGCTTCGCTGAGAGCTTCGTCAAAGCCGCAGGGATTGGAGCCATTCAGGCTGTGTCCCGCGAGGCTTATTTCACCGCCATTGAAGGCTCTGGGCTCGAATCCCCTGGTGGTGTGACAGAGGTCACAGTTGGTGGCAAAAAACAACGTTTTCCGGATCTCAAAGGAGAAAGCAGCAGAAAATCTCTTGAAGCCCTGGTGAAGAGCACAGGAAAAGAATCTCTTCAATGGGGACTAGCAGCAGGAATGTATTCAGGTCTCACCTATGGTCTAAAGGAGGCTCGTGGTGCTCATGATTGGAAAAACAGTGCAGTAGCAGGAGCAGTTACAGGTGTGGCGCTGGCTCTTACATCCAACGACACTTCCCATGAACAGATTGTTCAATGTGCCATCACTGGAGCCGCCATCTCCACTGCTGCTAATCTCCTTACAGGGATATTCTAA 534 0.5075 MSSNLETRSLLDELRDFDKGGFFDLGHPLLNRFAESFVKAAGIGAIQAVSREAYFTAIEGSGLESPGGVTEVTVGGKKQRFPDLKGESSRKSLEALVKSTGKESLQWGLAAGMYSGLTYGLKEARGAHDWKNSAVAGAVTGVALALTSNDTSHEQIVQCAITGAAISTAANLLTGIF* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g0107 177 PANTHER TIM23 13 174 IPR045238 GO:0022857
Vvi5g0107 177 Pfam Tim17/Tim22/Tim23/Pmp24 family 30 167 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g0107 - - vvi:100263757 336.65