Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g0096 ATGGAGCTTAAGATCAATCAATCACTCCTCATCTTCTCATTTTTTTCTCTCATCTTCTTGCTCAACCATGCGGAATCCGTCTGCGTTCCTCGCCATGCCTCAAAACAGGCGGATTCTCCAGACCAAGTTCCAGAGGTCTCTCCACAGCCGCAGCCGGTGCCGTCTTCGCCGCCGCCCAAGTCATCGTCATCTCCCCCACCCAAGTCTTCGTCGCCGTCATCGTCATCATCATCGTCATCGTCATTGTCGTCGTCGTCACAGCCACCACCACCGTCAGATCCCCCCTCCGATTCTCCGGACGGGACGATGTTGTTCGACACTGGTTTGATGGGGAGAGGACCCGGATTCGTCTCCAACACATTCAAACCCTTTCTGGACAGCAAGACGGACCATTCGGTAGGAGCCCTCAACCACATATGCAAGAAGACCGATTACTCCGATCTCTGCCTCTCCTCGCTAGCTCCTTTATTCGATGGACACAGCGACCCCGTTTCCATGCTTTATGTTGCGATAAAGGCTTGCACCCAACACGCCCAGTTGTCGCTGAACACGGCCCAGAAGATTGCGGAAGCGCCCTCCACTAACCCCACCACGGCCTCTAACCTCAGCGACTGCCAGGATAGTTACAGTGACGCTTTGGATAATCTGCAAGCAGCAAATGATGCCCTGGGCATTCGTGACTTTGGGGCAGTTAATAGCATGCTGAGCGCAGTGGTGACTGATGCTTCGGATTGCCAGGATCTCTTTCCGGGAAAGAGTTCTCCGATGCTCCACTACGAAGTCAAGCTTCGACAGATGGCTAGCAATTGCCTGGCCATTGCTTCATTGGCCACTTGA 837 0.5388 MELKINQSLLIFSFFSLIFLLNHAESVCVPRHASKQADSPDQVPEVSPQPQPVPSSPPPKSSSSPPPKSSSPSSSSSSSSSLSSSSQPPPPSDPPSDSPDGTMLFDTGLMGRGPGFVSNTFKPFLDSKTDHSVGALNHICKKTDYSDLCLSSLAPLFDGHSDPVSMLYVAIKACTQHAQLSLNTAQKIAEAPSTNPTTASNLSDCQDSYSDALDNLQAANDALGIRDFGAVNSMLSAVVTDASDCQDLFPGKSSPMLHYEVKLRQMASNCLAIASLAT* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g0096 278 MobiDBLite consensus disorder prediction 32 109 - -
Vvi5g0096 278 MobiDBLite consensus disorder prediction 45 66 - -
Vvi5g0096 278 NCBIfam pectinesterase inhibitor domain 129 274 IPR006501 GO:0004857
Vvi5g0096 278 MobiDBLite consensus disorder prediction 67 86 - -
Vvi5g0096 278 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 136 276 IPR035513 -
Vvi5g0096 278 Pfam Plant invertase/pectin methylesterase inhibitor 136 273 IPR006501 GO:0004857
Vvi5g0096 278 Gene3D Invertase/pectin methylesterase inhibitor family protein 134 276 IPR035513 -
Vvi5g0096 278 SMART PMEI_2 131 273 IPR006501 GO:0004857
Vvi5g0096 278 PANTHER PECTINESTERASE INHIBITOR-LIKE 22 276 - -
Vvi5g0096 278 CDD PMEI-like_2 139 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g0096 Vvi-Chr5 837761 838597 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g0096 - - vvi:104879208 416.387