Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g0095 ATGGAGGTAAATAGAAGAGTTGGGGTGGCAGTAGATTTCTCTGCATGCAGCAAGAAAGCCCTGAAATGGGCCTTGGACAACGTTGTCCGCGACGGGGATCACCTTATCATCCTTAGCGTCCTCCCTGAAGGACACTACGAAGAGGGCGAGATGCAGCTCTGGGAAACCACCGGTTCTCCATTAATTCCTTTGAGTGAGTTTTCTGACCCGATTATATCGAAGAAGTATGGGGTGAAACCCGACGCAGAAACGCTGGACATTGTCAATTGTGTTGCCAGGCAGAAAGATGTATACTGGGGCGATGCTCGGGAGAAGATATGCGAAGCAATTGACAATATTCCTCTAAGTTGCCTTGTCATTGGAAACAGAGGGCTGGGCAAGATCAAGAGGGCAATATTGGGCAGTGTTAGCAACTATGTGGTGAATAATGGTTCTTGTCCAGTTACAGTGGTGAAGAATGCGGAAGAAAGTGGAAAATGA 480 0.4771 MEVNRRVGVAVDFSACSKKALKWALDNVVRDGDHLIILSVLPEGHYEEGEMQLWETTGSPLIPLSEFSDPIISKKYGVKPDAETLDIVNCVARQKDVYWGDAREKICEAIDNIPLSCLVIGNRGLGKIKRAILGSVSNYVVNNGSCPVTVVKNAEESGK* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g0095 159 PANTHER IMP2'P 1 156 - -
Vvi5g0095 159 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 5 153 - -
Vvi5g0095 159 Gene3D HUPs 2 159 IPR014729 -
Vvi5g0095 159 CDD USP_Like 6 151 - -
Vvi5g0095 159 PRINTS Universal stress protein signature 112 124 IPR006015 -
Vvi5g0095 159 PRINTS Universal stress protein signature 4 22 IPR006015 -
Vvi5g0095 159 PRINTS Universal stress protein signature 130 152 IPR006015 -
Vvi5g0095 159 FunFam Universal stress protein family protein 2 155 - -
Vvi5g0095 159 Pfam Universal stress protein family 4 152 IPR006016 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g0095 Vvi-Chr5 833199 834955 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g0095 - - vvi:100255026 317.775