Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g0094 ATGAACAGGAGGGTCTGCCAGTTCCTTCATTCAGCTTTGATCAATATGATCGTGTTCGAGATCAAATCAGAGATGGAAAGCGGTAAGACCAATACAGAGATGGAAAGCAGTAAAAGACCAGGAGAAGAAATCATTCAAGTACATGATGAACTAGTATCTACCATAAAAAAAAAAATGGACACAGTCTTTCCCCATTGTATCTGCAGAGTCCAGGAGAGACTTGTCCAGGAAAACGAAAAGGCCTACTACCCTGAACTGATCTCCATTGGCCCTTTCCACCATGGAAAAGAAAAATTGAAAGACATGGAAGATCATAAATGGCGGTACCTGCATGCCCTCCTTAGTCGAAAACCGAACCTGGAAGCCAGGTTGGCCATCTGCGTGAATGCCCTCAGAGAGTGTGAGCTCAAAGCAAGAAACTGCTACGCAAAGAAAGAGAGCATCAATCTCAGCTGCGACGAATTCGTGAAGATGATGCTAGTCGATGGCTGCTTCATCATTGAGCTCTTCCTCAAGTATGCTCACAGGAGTTTGAGAAAGAGGGGGGACCCCATTTTCACCTTACACGAAAGATTCCGTACTCTGAGGTGTGACATGATCCTATTGGAAAACCAATACCCTCTCTTTGTTCTTCAGCGGTTGTTCAATCTTGTACCCACCCCTCAGCAGTCCAAGTCTCTCAATGGGCTTGCCTTCCATTTCTTCAGGACCATGATCCCCGGAAACAAGAAAGCTACTCAGGATAAGTTCAGCCAAGAAGGCAACCACCTACTGGACTTGATCCACAACTGCTTCCTCCCCACATTCTCAGAAGTGCATCCCGCTGCTGAGAAACCGACGCCACCAAAGCAATCAAGCAAACGAGAAAAGCTGCAAAGTGCTTCGAAGCTCCATGAGTCTGGAATCAAGTTGAGGAAGGTCAACGAAGGAGTCGTACTGGACATTGCGTTTGAAAATGGGCTTCTGTCCATCCCGGAGGTGAAAATTCATCAGTATACCGAGACTCTCTTCAGGAATCTCATTGCTGGGGAGGAGTGTAATTGTGATAATTTTGTGCACGTAACGTCTTATGTTTTTCTCTTGAGTAAGCTCATCAGTTCACCCAAAGACGCAAAATTTCTGAGGCAAAAGAAGATCCTCATCAGTAGTTTGAAGGAAGATAATGACATTTCTGAGCTGTTCAAGAAGCTGTCCAAGGAGGTGGAAATGAACCAGTTCTATTTTGACTGGCTATGTGAACAAGTGAATGAATATAAGAGTGCGACTTGGTTCACCCTTCCCTCATGTTTTCAAAAATAA 1299 0.448 MNRRVCQFLHSALINMIVFEIKSEMESGKTNTEMESSKRPGEEIIQVHDELVSTIKKKMDTVFPHCICRVQERLVQENEKAYYPELISIGPFHHGKEKLKDMEDHKWRYLHALLSRKPNLEARLAICVNALRECELKARNCYAKKESINLSCDEFVKMMLVDGCFIIELFLKYAHRSLRKRGDPIFTLHERFRTLRCDMILLENQYPLFVLQRLFNLVPTPQQSKSLNGLAFHFFRTMIPGNKKATQDKFSQEGNHLLDLIHNCFLPTFSEVHPAAEKPTPPKQSSKREKLQSASKLHESGIKLRKVNEGVVLDIAFENGLLSIPEVKIHQYTETLFRNLIAGEECNCDNFVHVTSYVFLLSKLISSPKDAKFLRQKKILISSLKEDNDISELFKKLSKEVEMNQFYFDWLCEQVNEYKSATWFTLPSCFQK* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g0094 432 PANTHER BNAC04G53230D PROTEIN 64 423 - -
Vvi5g0094 432 Pfam Plant protein of unknown function 67 423 IPR004158 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g0094 Vvi-Chr5 829949 832259 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g0094 - - vvi:104879207 848.195