Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g0087 ATGGAAGACGTTGGTGATGATTTCGGCGACTTATACGCGGACGTCGAAATTCCAGCCAGCTCAGCAATCAATGGTGCGCCAAACTTCGTAAGATTCTACGAAAATGACACCCACAAAGCAGAGGATTTCGCCTCCGGTTCGGGTTCGAAGGAGCTCGATATCGGAGACGCCGGTTCGAGTCGGAAAAGTGAGAACGAGGAGTCGAATGTGGTGGATAATGGAAGTGATAGTGAAGATGATTTTAACATTGTCTTGAATGATGAGGACGGCCAGAGGTTTCCGGTCCGGAGTGGTGTTGGGGTTCTGGGAGGGAGTGATGGTGAGGATGGCGATGGAATGGAGCAGGGTTTTGCAGGCGGTGAGAGAGGAAATGGAGCGAAGAGTGGTTATCATTTGCAGTTTTCACAATACAAGTACATACGGTCTCACTCAACAGTGTTTCCAAGTAACGCAAAAGCCAATGGGACTGCAAAGGTTGCTTCCTTCTCTTCAATGTTGGCTAGAGGTGATTGGGAGGAAAATGGAAGCAACCAACATAAGGGATCAAGCTCAGTTGAAATTGCTTCAACTCACACCAGAGCTGCTCCACTAGTAGCTCAAGGTGGATATGGTTTCTCACTTCCCTGGTATAGGACTATTCTAGATGTTAATATCGATACATTTGAGCAGAAGCCCTGGAGGCATCCTGGAGTAGATTTAACTGATTTCTTCAATTTCGGTTTCAATGAAGAAACTTGGAAAAATTATTGTAACTCCCTGGAACAATATCGAAAGCAGATGCACATACTGAACCAGACCCCAGTGCATCACTCTTCAAAACCTAATCAGACTGAAGAAGGTGGACTTGAGCATGAGAAAGATGGCCAAGAACCTGTCTGCAAACAGGGAAGTATAGTTTCTCCTACTTCAAAAAGTACTGACAGGTTGGAACTGCCAAAAGGCAGAGCTATTCAGGTTGAAGGTAGCACAGGTGAACGTCAACCATCTATGGATGTACGGCGTCCACGTCATCGAGATTCTGGTGTTGTGATACATATTGCTGTGCAGGACTCTGTGGATGATGAAATAGACAATATAGATAGCACTGAAGATGAATCCTCAGAAAATGGGGATTTTAAAGTGGGTGATAACAAAGATATTCACTGTTATGGTAGTGGCAATGGAAACAAGCCGTGTCTGGAGAAAAATGTCACATTAGACAGGTCTTCTGTTCTGAAGAGGTTTTCCAAACTATCAACTGCATCTAATCCAGTGTCTGTGGATTCTGATAATGTTGGAACTGGAAAGATTCCTGATGGTGACAAACATTGCTCTCAAAATATGAATGCTCATGTGCCTGAAGGAATTTCTGAAGTGTTGGATGCACTTAATAACTCAAAGGAAATGGTTGGAAGGAATACATGCAATACAGATCCATGCATGATGGAAACAGAATTATCACTCGATGAACAGGTTAGTCACAGCCCTAGCTCATCCCGTCGTGGAAGTCATTCTGTAGCATCCCAAGATGGTGGTTATATTGATCCAGAAAAGAATCAGAATGCTAGAAGAAAGCCATCGTCAAATTTACTAACTGACCGACCAGAGTTGATCAAATCTGAGTATTATCTCCACAAGAACTCTAAAAACAAAGTTGGCAAAACAAAGCCAATTGATTGTAAAGATTCTTTTAGAAATAGAAGTCCTGTTCAGGAGGCACGGAAGCATCGTGATTCCAGCACTTGCAGTGTGGATAAGATGGCAATCCGCAGTGGTAATGATATTGCCTCCCCAATGTCTAAGACAGTAGATAGCCTGTATGATAGGAATCATTCATCAGTTGGTCATGGCAGACAGAAGGAAAGGCTGCATGATTTTGGTTCTCATGATGATGATGTCTCCCCCATGTCCAATTCAGAAGGCTTGCATTATAAGCATTACTTATCAGCAGGCCGTAGGCGACGGAAGGAGAGGTTGTGTGATTTGGGATCTTATGATGGTGATTTCTCCCCCATGTCTGACGTAGAGGGCATGCACAGTAGGGCTCATTCCTCTGTTGTACGTCAGGGAAGGAAGGAAAGGCTGGATGATTTTGGTTCTTATGATAATGATATCTTCCCCGTGTCTGAGACTGAGGGGCTTAGTGATAAGGGTCACTCATTTGCTAGTCGCCGCAGACGGAAGGAACTGCATGATTTTGATTCTTATGATCGAAAAGGTTTCTCATATTATAGGGAAACAGAACTTTCCTTCAATTACTGCAGTGAAAAGTTTGCTAACAATCATGTCCAAACTGCGAGTGCTGAAAATCCTCATTGGAAAGATCATCGGAGCTTTAGAGACGAGATGTATCCACATTTCAGAAACAAATATATTTTTGAAAAAAGAATAACCAGAGCGGGCAACAAAATGATGGAAAGAGATTGGTATCATCGTGAAAGGAATGTCAGTATAGAGGACATAGATACTCTCACTCATAGAGAGTCCAGGCGGTTGGTTTTGAAGTACTCCTACTCAGACAAAGAAAGGGATACAAGACGGAGAAAGAAAAATGACAAACTCCAATTCCAAGAAGGACCTGATAATGATGATGATTTGTTTCAATGTAAAAATACAGATGATGTTGCACAAGAAAAAATCACAAGATCTGTTCCATTCATGTGCAAGGAGAGGAATTCTTTGGCTGAAAAATATGGAAGACACGTGCCAAGTACTGGGAGAAAAGTAAATTTATATGGGAGAAGGAAGAGATATGAGGATGGTCATTTGGATTTGGATAGTTCCTGGTCTATTGGGGTCGAGGATGAATATGGAAGACATGTGGATCATCAGTCTTTGTCTTCTTGGTCTTACAGAGAACCTCATACAGCCAATGGAAGAAATGATGTGAATGATTCAAGATTAACTGAAAGACATGGGAGAGATAGGAGACAAATATGTCCTCAAGGATATAGAGAAAGTGACTGGTTTGGCAATGATAATGATGCCTATAACACTAAAGACAGTATCATTGGTCCTGATGATCAGGTTCAGATAGGGAGACGAAGATCAAGACGGCAATATGAAGCATTGCACTGGACTGAGAAGGAATTAATCTCCAGTCATCTAGATGAAAATTTGTATAATGAGGAGGCATCACTTTCCTATGAAAGGACTTCTGGGCACACAAGGATTCATACTAAATATGGATCTGCCCATGTTGGGATGCTTGTACATAACAAGAAATCACAGCAGCAAAGATACAAAAGGATAAGAGAAGGAAGAAGTGATGATTTTATTGATAGAAGTTCTAATGTTCTTGGTCAAGGTAATCATGAACAGGCAGTCTTGAGGAGCAGGGCATCGGTTGACTTGATTGTAGGGGAAGGAAAGTCCTCTGGAAGACGCTCTGAAGCCAGAAGTGCAGTGCACCATGACAGGTTTGAAAACATGGATTGGAAGATTGATGAGGATCAGGGAATTCTCAAGGATGTCAATGGACCTCAGAGAGGGAAGATCATCCAACCTGACCTCAAAAGTGAAAGCAACTGGAATAATGAGAAATGTCTTGATAAGTTTCTGGTTACAGAGCATGACGAAGCTTTGGATATTGAGGAGGGTCAGATCATACCAGAAGAAATGAACGAGGATGACTCAGTGGAAACAAAAGATGCATCTGAAAGTATAACACCATCCAGAAATGTGAAAAGAAGATTGGGCAATGCAAATGCTGCAAATGGGAATAAGGTTGTTGCAGAATGCGACAACCAACGGATTCTCCAGACGCTAGCAAAGATGGAGAAACGACAGGAGCGGTTTAAGAAGCCCATCACTCTGAAAAAGGAGCCAGACAAGATTCCAAAGCCTCAAGTTGATCCAATAGTTGAGATGGCTGAAACCATGCAACAAAGGCCACTGCGAAAGAGGCGATGGAATGGCAGCTGA 3903 0.4256 MEDVGDDFGDLYADVEIPASSAINGAPNFVRFYENDTHKAEDFASGSGSKELDIGDAGSSRKSENEESNVVDNGSDSEDDFNIVLNDEDGQRFPVRSGVGVLGGSDGEDGDGMEQGFAGGERGNGAKSGYHLQFSQYKYIRSHSTVFPSNAKANGTAKVASFSSMLARGDWEENGSNQHKGSSSVEIASTHTRAAPLVAQGGYGFSLPWYRTILDVNIDTFEQKPWRHPGVDLTDFFNFGFNEETWKNYCNSLEQYRKQMHILNQTPVHHSSKPNQTEEGGLEHEKDGQEPVCKQGSIVSPTSKSTDRLELPKGRAIQVEGSTGERQPSMDVRRPRHRDSGVVIHIAVQDSVDDEIDNIDSTEDESSENGDFKVGDNKDIHCYGSGNGNKPCLEKNVTLDRSSVLKRFSKLSTASNPVSVDSDNVGTGKIPDGDKHCSQNMNAHVPEGISEVLDALNNSKEMVGRNTCNTDPCMMETELSLDEQVSHSPSSSRRGSHSVASQDGGYIDPEKNQNARRKPSSNLLTDRPELIKSEYYLHKNSKNKVGKTKPIDCKDSFRNRSPVQEARKHRDSSTCSVDKMAIRSGNDIASPMSKTVDSLYDRNHSSVGHGRQKERLHDFGSHDDDVSPMSNSEGLHYKHYLSAGRRRRKERLCDLGSYDGDFSPMSDVEGMHSRAHSSVVRQGRKERLDDFGSYDNDIFPVSETEGLSDKGHSFASRRRRKELHDFDSYDRKGFSYYRETELSFNYCSEKFANNHVQTASAENPHWKDHRSFRDEMYPHFRNKYIFEKRITRAGNKMMERDWYHRERNVSIEDIDTLTHRESRRLVLKYSYSDKERDTRRRKKNDKLQFQEGPDNDDDLFQCKNTDDVAQEKITRSVPFMCKERNSLAEKYGRHVPSTGRKVNLYGRRKRYEDGHLDLDSSWSIGVEDEYGRHVDHQSLSSWSYREPHTANGRNDVNDSRLTERHGRDRRQICPQGYRESDWFGNDNDAYNTKDSIIGPDDQVQIGRRRSRRQYEALHWTEKELISSHLDENLYNEEASLSYERTSGHTRIHTKYGSAHVGMLVHNKKSQQQRYKRIREGRSDDFIDRSSNVLGQGNHEQAVLRSRASVDLIVGEGKSSGRRSEARSAVHHDRFENMDWKIDEDQGILKDVNGPQRGKIIQPDLKSESNWNNEKCLDKFLVTEHDEALDIEEGQIIPEEMNEDDSVETKDASESITPSRNVKRRLGNANAANGNKVVAECDNQRILQTLAKMEKRQERFKKPITLKKEPDKIPKPQVDPIVEMAETMQQRPLRKRRWNGS* 1301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g0087 1300 MobiDBLite consensus disorder prediction 1260 1279 - -
Vvi5g0087 1300 PANTHER FIP1[III]-LIKE PROTEIN 1 1299 IPR044976 GO:0006397
Vvi5g0087 1300 MobiDBLite consensus disorder prediction 276 291 - -
Vvi5g0087 1300 MobiDBLite consensus disorder prediction 40 80 - -
Vvi5g0087 1300 MobiDBLite consensus disorder prediction 268 335 - -
Vvi5g0087 1300 MobiDBLite consensus disorder prediction 944 969 - -
Vvi5g0087 1300 MobiDBLite consensus disorder prediction 836 861 - -
Vvi5g0087 1300 MobiDBLite consensus disorder prediction 541 574 - -
Vvi5g0087 1300 MobiDBLite consensus disorder prediction 951 969 - -
Vvi5g0087 1300 MobiDBLite consensus disorder prediction 55 69 - -
Vvi5g0087 1300 MobiDBLite consensus disorder prediction 1260 1275 - -
Vvi5g0087 1300 MobiDBLite consensus disorder prediction 481 499 - -
Vvi5g0087 1300 MobiDBLite consensus disorder prediction 481 527 - -
Vvi5g0087 1300 Pfam Fip1 motif 215 257 IPR007854 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g0087 Vvi-Chr5 771998 782111 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g0087 - - vvi:100258583 2624.35