Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g0086 ATGGCCTCTCTCTTTCATCTCTTTCTCTACATCACCCTTCTTCACACCTCCATCAATGGATTCAATGGCCATTCCATTAAACCACCTATCACTGCACGTCCTTATTTCAGTTGCGGCGGCGGCGTCTTCCGCTACCCATTTTGGCACCAAGATCAACCGTCGGGGTACTGTGGATACCCGGGCTTCGGGATCTCCTGCGGTGGCGATGGCAGTGGCCCTGTTCTCCGCCTCTCCGGCGATGCCTACAGCATCATGAAGATCAATTACTCTGAAAATACGCTTACCCTCCGCTACGTCGACATAAACAATGGGAGTTGTCCCCGGGCACCTCATGGTGTTACATTGGACAACTCTTCCGCTTTCAGCTACACTGCACGTAATAACATGCTGCGTTTCTTCTATAACTGCACGCTTTATCCACCTTCACTGCCGTCTATGGAGTGTCTTCGGCATGGGACGAAGCGCTCTTATGTGTTTATTGTGGGAGCAGTGCCGGAGTTCGACTGGAGTGGGTACTGTGAAACGACTGCGACTGTGCCGGTGATTGAGAAGTCGGTTGGTGGAGATTTGGTTGATGATTTTGGTAGAGGCATACGAGAAGGGTTCGAGCTAACGTGGAGGTCCGACGGTGGTTGTCGTTCGTGTGAAGACAGTGGCGGATTCTGTGGATATGGCGGTGGCGATCTTCACCGGAATTTCTTCTGCTTTTGCTCCGGTGGCCGCCGTTCATCTAACTGTCACAATAACGGTGTGGTTCCAATCAATATTCTCCAGCCAAATTTCGCTGCCATTGGCACAGTGGTGTTTGGAGGTTTAATGGTGGCAGCAACATTTTTTTATTTCATCCAGAGAAGGAAAATTGGCTTATACAAACCAGTTGGTCCTGTCAAATAG 894 0.5022 MASLFHLFLYITLLHTSINGFNGHSIKPPITARPYFSCGGGVFRYPFWHQDQPSGYCGYPGFGISCGGDGSGPVLRLSGDAYSIMKINYSENTLTLRYVDINNGSCPRAPHGVTLDNSSAFSYTARNNMLRFFYNCTLYPPSLPSMECLRHGTKRSYVFIVGAVPEFDWSGYCETTATVPVIEKSVGGDLVDDFGRGIREGFELTWRSDGGCRSCEDSGGFCGYGGGDLHRNFFCFCSGGRRSSNCHNNGVVPINILQPNFAAIGTVVFGGLMVAATFFYFIQRRKIGLYKPVGPVK* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g0086 297 Pfam Wall-associated receptor kinase galacturonan-binding 37 96 IPR025287 GO:0030247
Vvi5g0086 297 Pfam Wall-associated receptor kinase C-terminal 148 239 IPR032872 -
Vvi5g0086 297 PANTHER OS01G0690200 PROTEIN 4 250 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi5g0086 34 251 Receptor kinase-like Gene Family AT5G38260 24.280 4.74e-14 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g0086 - - vvi:104879205 617.461