Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g0085 ATGTCTCTGCATTCAGTCCATGGAGATGACAACCAGAACTCCACAGCAGCAGTGATCAAACCAGCCCAAGTGTACTCAAACTACAGAAAGCTTCTGCTCCATGGGACATGCACAAACAGAGATATCAGCATCTCACAGAGCAGAGACTCATCTTCTGGGATTCCACAGTACATAGTTCAGATTGTGAATACATGTGTTTCTGGATGTGCTCCTTCAGATATCCATCTCCATTGTGGCTGGTTTGCCTCTGCAAGAATAGTAAACCCAAGAATCTTCAAGAGGCTCTTCTATGATGACTGCTTGGTGAATGGAGGAAAGCCTTTAAAGACCAGTCAGATCATCAGATTCACTTACTCAAACTCCTTCATGTACCCACTTGCATTCAAGTCTGCCAAGTTTTGCTGA 405 0.442 MSLHSVHGDDNQNSTAAVIKPAQVYSNYRKLLLHGTCTNRDISISQSRDSSSGIPQYIVQIVNTCVSGCAPSDIHLHCGWFASARIVNPRIFKRLFYDDCLVNGGKPLKTSQIIRFTYSNSFMYPLAFKSAKFC* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g0085 134 PANTHER PROTEIN TAPETUM DETERMINANT 1-LIKE-RELATED 26 132 IPR040361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g0085 Vvi-Chr5 753418 753947 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g0085 - - vvi:104879204 273.092