Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g0083 ATGTCTGCAAAAAATCAAAAACCTCACAAAAACCCTCACAGTTCCTTCAATTTTTTTCCTCCCCGCACGAATCTCTCCAAAAGGGGAACTGGGTTAAGCTTATATGTGGTGCCAGCTTCGAGGTGCGAGAAAGTTGATTGCATTGACTGTGCTGCGGACGCTTCGGTAGTGAGCGCTGTGAATGAAGGAATTGAGGCGGCTAGAGAGATTGTGCCGCTTCGAAGACCTTGGGTAATGATCAGTGTTAACGATAATGAAGATCTTCATTTTCGCAAAGCCGAATTTGATCCAGCAGACTGTCCTCCAGATTGTTCAAGGCCATGTGAGGTGGTTTGTCCTGCTAATGCAATTTCACTGGTAGAAGGGAAATCAACAGTAGAACTTCCCCACAGTACAAGATCACCTGGTGCATTGAAGGGTGGAGTTATAACCGAACGCTGCTATGGCTGTGGCCGGTGCTTTCCTGTTTGCCCATTTGACAAAATAAGTGTAGTTACATATGTAAGAAATGCAACTGCCACAACTGAACTTCTCAAGAGAGACAACGTTGACGCTGTAGAGATACATACAAGTGGAAGGCAGAGTGCTTTCTTTAGAGAACTTTGGAATCATTTGGGAGATGCAATTAGGTATCTGAGACTGGTAGCAGTAAGTATGGAACCTTTCGCTATTGTTGGAATATCTAATTGA 690 0.442 MSAKNQKPHKNPHSSFNFFPPRTNLSKRGTGLSLYVVPASRCEKVDCIDCAADASVVSAVNEGIEAAREIVPLRRPWVMISVNDNEDLHFRKAEFDPADCPPDCSRPCEVVCPANAISLVEGKSTVELPHSTRSPGALKGGVITERCYGCGRCFPVCPFDKISVVTYVRNATATTELLKRDNVDAVEIHTSGRQSAFFRELWNHLGDAIRYLRLVAVSMEPFAIVGISN* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g0083 229 Pfam Iron-Sulfur binding protein C terminal 177 220 IPR021039 -
Vvi5g0083 229 ProSitePatterns 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 147 158 IPR017900 -
Vvi5g0083 229 ProSiteProfiles 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. 91 122 IPR017896 -
Vvi5g0083 229 MobiDBLite consensus disorder prediction 1 22 - -
Vvi5g0083 229 Gene3D - 86 199 - -
Vvi5g0083 229 SUPERFAMILY 4Fe-4S ferredoxins 78 175 - -
Vvi5g0083 229 ProSiteProfiles 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. 138 167 IPR017896 -
Vvi5g0083 229 Pfam 4Fe-4S dicluster domain 103 160 IPR017896 -
Vvi5g0083 229 PANTHER PHOTOSYSTEM I IRON-SULFUR CENTER-RELATED 44 175 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g0083 - - vvi:100255010 442.58