Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g0074 ATGGCTCCATCCTCATCTTCCGAAGGGCTGATACTCGTGAATCGTGAGCCGAGCGGCATCGCCTTCGTGACGATCAATCGGCCGCAGCTGCTGAACTCGCTGACCAGGCCGATGATGGTCGATCTGGCGCGGGCGTTCAAGAGCCTCGACGCCGACGATTTGGTTCGGGTCATTGTGATCACTGGATCGGGTCGGGCGTTCTGTTCCGGCGTGGATCTTACGGCGGCGGAGGAAGTGTTCAAAGGCGATGTGAAGGACGTGGAGATCGATCCGGTGGTGCAGATGGAGCGGTGCCGGAAACCGATTGTTGGCGCCATCGGAGGGTTTGCGGTTACTGCTGGATTCGAAATTGCTCTCGCTTGTGATATCTTGGTTGCTGTTAAAGGAACCAAGTTCATCGACACTCATGCTAGGTTTGGGATATTTCCTTCATGGGGTCTCTCGCAGAAGCTCTCACGGATTATAGGAGCCAACAGAGCTCGTGAAGTGTCTTTAACAGCTATGCCTGTGACTGCAGAACAAGCTGAGAGGTGGGGATTTGTGAACCATGTTGTTGAAGGAAGTGAACTCTTGAAGAAAGCTCGAGAAGTTGCAGAGGCCATTATAAAAAATAATCAAGATTTGGTGATGAGGTACAAGTCAGTTATAAACGATGGCCTCAAACTGGACTTGGGTCATGCTCTTGCTCTAGAAAAGGAACTGGGCAAACCATAG 714 0.5168 MAPSSSSEGLILVNREPSGIAFVTINRPQLLNSLTRPMMVDLARAFKSLDADDLVRVIVITGSGRAFCSGVDLTAAEEVFKGDVKDVEIDPVVQMERCRKPIVGAIGGFAVTAGFEIALACDILVAVKGTKFIDTHARFGIFPSWGLSQKLSRIIGANRAREVSLTAMPVTAEQAERWGFVNHVVEGSELLKKAREVAEAIIKNNQDLVMRYKSVINDGLKLDLGHALALEKELGKP* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g0074 237 SUPERFAMILY ClpP/crotonase 8 233 IPR029045 -
Vvi5g0074 237 CDD crotonase-like 11 201 - -
Vvi5g0074 237 FunFam probable enoyl-CoA hydratase 1, peroxisomal 8 237 - -
Vvi5g0074 237 PANTHER ENOYL-COA HYDRATASE 6 236 - -
Vvi5g0074 237 Pfam Enoyl-CoA hydratase/isomerase 16 234 IPR001753 -
Vvi5g0074 237 Gene3D - 4 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g0074 Vvi-Chr5 669146 670992 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi5g0074 19 227 Acyl Lipid Metabolism Gene Families AT1G60550 34.419 6.15e-29 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g0074 K01692 - vvi:100246523 452.21