Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g0070 ATGAAGTCAGTTTTAAGCGCGGTGCCTGTCTTAATACTGACGCTGACTGTGGTCGCCATTCAGTCGGCGTCCGCGGCTCCGGAGGCCTTCCGGCGAGACCCGGGGCATCCTCAGTGGCACCACGGGGCTTTTCACGAGGTCAGAGATAGTGTCCGATCTGATGTTCGCCGCATGCTCCATACGCGTGCCGAGGTTCCATTCCAGGTCCCACTCGAAGTAAACATAGTCCTCATTGGTTTCAACAATGATGGAGGCTATAGGTATACGGTTGATGCACACAAATTGGAAGAGTTCCTCAGAATCAGCTTCCCATCTCACAGACCCTCATGCTTGGAGACAGGCGAGCCCCTTGATATTGAGCATCACATTGTCTACAATGTGTTTCCTGCTGGGCAACCAGAGCTGATAGCACTGGAGAAGGCACTGAAAGAGGCCATGGTTCCTGCTGGAACTGCTAGAGAGTCTGATTATGGAAGGGAGGTGCCGTTGTTTGGGGTGGATGCAACAGCTGTGGAGCCTGTATTTCAGAAACTATATTCCTACATATTTGACATGGATAATAGTGGATACAATGCAGTAGAGATGGATAGACCTGTGCCAAGTGCAATTTTTATTGTCAATTTTGATAAGGTGAGAATGGATCCTAGGAACAAGGAGATTGATCTCGACAGTTTAATGTATGGAAAAATTACCCAGCTAACTGAGGAAGAGATGAAAAGACAGGAGGGGGAATACATTTATCGTTATCGATATAATGGAGGAGGGGCATCTCAAGTTTGGCTGGGTCTTGGAAGATTTGTTGTCATCGACCTCTCAGCAGGGCCTTGCACATATGGAAAGATTGAAACTGAAGAAGGAAGTGTCAGTTCAAAAACACTCCCACGGTTGCGGAATGTGTTGTTTCCAAGGGGTTTTAATGCAGCTAGTGTTCATTCTACTCATGATACTTTTGTTGGACAACTTGCTGCTTTGGTTTCAACCACAGTTGAGCATGTTATTGCCCCAGATGTTAGGTTTGAGACTGTTGATCTGACGAAAAGGTTGCTTATACCAATCATAGTCCTTCAGAATCATAATCGATATAATATCTTGGACAAAGGCCAAAATAACAGCATAGACATTGAAGCAATTGAGGCCGAGGTTAAAAAGATGGTTCATTATGGTCAGGAAGTAGTAATTGTTGGGGGTTCACATGCACTACATCGCCATGAAAAGTTGACAATTGCCGTTTCAAAGGCAATGCGAGGCCATTCCCTGCAAGAAACAAAGAAGGATGGACGTTTCCATGTTCATACAAAGACATATTTGGATGGTGCTATTCTCAAAGAAGAAATGGAACGATCTGCTGATGTGCTTGCAGCTGGTTTACTTGAGGTGGCTGACCCATCTCTTTCAAGTAAATTCTATATCCGCCAGCATTGGATGGATGAATCTGATGGTTCAGGTGATTCCATACTAAAGCATAAACCTCTTTGGGCTACTTATGCCTCTAAACGTGGGAAGGAGAAGAAAAAGAAAACAGAAAAGAAACAAAGTGATCTACACCGAACTTATGGAACAAGAGTGATTCCTGTCTTTGTTCTATCATTGGCTGATGTCGATCCACACCTTATGATGGAAGATGAAAGTCTTGTATGGACAAGTAATGATGTTGTCATTGTGCTTCAGCATCAAAATGAAAAAATACCTCTAAGTTATGTTTCAGAAACAGAGAGAAGGCATGCTATTCCATCACAAGCACAACGTCACATATTGGCAGGTCTTGCTTCTGCCGTGGGTGGTTTGAGTGCACCGTACGAAAAGGCTTCTCATGTGCATGAAAGACCGATCGTGAATTGGCTCTGGTCAGCTGGTTGTCATCCGTTTGGACCATTCTCCAATACTTCCCAGATCAGTCAAATGCTCCAGGATGTTGCCTTGAGGAACACAATATACGCTCGTGTAGATTCTGCACTACACAGAATTCGGGATACATCAGAGTATGTACAAACTTTTGCTGCTGAATATCTGAAAACCCCACTTGGTGAACCAGTCAAGGGCAAGAAAAATAAGTCGAGCACTGAGCTATGGTTGGAAAAGTTCTACAAGAAGAAAACTAACTTGCCTGAACCTTTACCTCACGAATTAGTTGAAAGACTAGAGAAATTCTTGGATAACCTTGAGGAAGAACTTGTAGATCTATCATCCCTGTTATACGATCATCGGTTACAAGATGCACATCTGAACAGCTCAGAAATTTTACAAAGCACTATCTACACCCAACAGTACGTAGATTATGTTTTGGTGAGTGAGAAGGAGAAAATGAAATGCTGTGACATCGAATATAGATTCCCGGTGGAGTCTTCTCAAACGTTCATCTACGGTGGAATTCTTCTTGCTGGATTCTTTGTATATTTCCTGGTCATTTTCTTTTCATCTCCTGTGCGTTAA 2430 0.4354 MKSVLSAVPVLILTLTVVAIQSASAAPEAFRRDPGHPQWHHGAFHEVRDSVRSDVRRMLHTRAEVPFQVPLEVNIVLIGFNNDGGYRYTVDAHKLEEFLRISFPSHRPSCLETGEPLDIEHHIVYNVFPAGQPELIALEKALKEAMVPAGTARESDYGREVPLFGVDATAVEPVFQKLYSYIFDMDNSGYNAVEMDRPVPSAIFIVNFDKVRMDPRNKEIDLDSLMYGKITQLTEEEMKRQEGEYIYRYRYNGGGASQVWLGLGRFVVIDLSAGPCTYGKIETEEGSVSSKTLPRLRNVLFPRGFNAASVHSTHDTFVGQLAALVSTTVEHVIAPDVRFETVDLTKRLLIPIIVLQNHNRYNILDKGQNNSIDIEAIEAEVKKMVHYGQEVVIVGGSHALHRHEKLTIAVSKAMRGHSLQETKKDGRFHVHTKTYLDGAILKEEMERSADVLAAGLLEVADPSLSSKFYIRQHWMDESDGSGDSILKHKPLWATYASKRGKEKKKKTEKKQSDLHRTYGTRVIPVFVLSLADVDPHLMMEDESLVWTSNDVVIVLQHQNEKIPLSYVSETERRHAIPSQAQRHILAGLASAVGGLSAPYEKASHVHERPIVNWLWSAGCHPFGPFSNTSQISQMLQDVALRNTIYARVDSALHRIRDTSEYVQTFAAEYLKTPLGEPVKGKKNKSSTELWLEKFYKKKTNLPEPLPHELVERLEKFLDNLEEELVDLSSLLYDHRLQDAHLNSSEILQSTIYTQQYVDYVLVSEKEKMKCCDIEYRFPVESSQTFIYGGILLAGFFVYFLVIFFSSPVR* 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g0070 809 Coils Coil 710 737 - -
Vvi5g0070 809 PANTHER TRANSMEMBRANE PROTEIN-RELATED 10 809 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g0070 Vvi-Chr5 615450 645269 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g0070 - - vvi:100258488 1582.39