Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g0059 ATGGCTTCATCATCATCATCTCCTGCAGTTACTGAGCGACGAGGCATTCCAGGAGCTTCCTTTGTACACGATGTTCAAACCTATCTTACTGAATCAGGCCTCGATTGTAACTCTGCCCTCGCTTTTCTTCAAGAGAGACTTCAGCAATACAAGTTAGTTGAGATGAAACTTCTTGCTCAGCAAAGGGATCTTCAGGCAAAGATCCCAGACATTGAAAAGTGCTTAGATGTAGTTGCCACTTTGGAAGCTAAGAAGGGTACTGGTGAGCCGCTTATAGCTGATTTTGAAGTCTCCGAAGGCATATATTCCCGGGCTCGGATTGAGGATACTGATTCAGTTTGTTTATGGTTGGGAGCAAATGTTATGTTGGAGTACTCATGTGAAGAGGCCACTGCTCTTCTCCAAAAAAATTTGGAAAACGCTAAAGCCAGTCTGGAAGTTCTTGTTACTGACCTACAGTTCTTAAGGGATCAAGTGACAATTACCCAGGTCACAATTGCTCGTGTGTATAACTGGGATGTTCATCAGCGGAGAATTCGGCAAGCTGCTGCTGCTCAAGACTCTTGA 567 0.4444 MASSSSSPAVTERRGIPGASFVHDVQTYLTESGLDCNSALAFLQERLQQYKLVEMKLLAQQRDLQAKIPDIEKCLDVVATLEAKKGTGEPLIADFEVSEGIYSRARIEDTDSVCLWLGANVMLEYSCEEATALLQKNLENAKASLEVLVTDLQFLRDQVTITQVTIARVYNWDVHQRRIRQAAAAQDS* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g0059 188 CDD Prefoldin_alpha 40 171 - -
Vvi5g0059 188 PIRSF Prefoldin_3 1 187 IPR016655 GO:0006457|GO:0016272
Vvi5g0059 188 PANTHER PREFOLDIN SUBUNIT 3 5 184 IPR016655 GO:0006457|GO:0016272
Vvi5g0059 188 SUPERFAMILY Prefoldin 40 169 - -
Vvi5g0059 188 Gene3D - 36 186 IPR009053 -
Vvi5g0059 188 FunFam Prefoldin subunit 3 34 177 - -
Vvi5g0059 188 Coils Coil 138 158 - -
Vvi5g0059 188 Pfam Prefoldin subunit 50 172 IPR004127 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g0059 - - vvi:100265427 344.354