Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g0055 ATGGACATTGATTCGGATTTCCGGAATTTAAATTTGAAATCACCAGAGGACGATGCGCCTATGCAAATGGATGCTGCAGAATCTGCCCACATCAAAGGCAAAGAGAAAGAAGATATTTCCGAGTCACTGGAGAAGCTACATATCGAGGAATCCTCATCTGGGTCAGCAGGGTCTTCATCAATTAGTTTCAAAAGAAAGCCAGTTATTATTATCGTTGTAGGGATGGCAGGGAGTGGGAAGACAACGTTTCTTCACCGGTTGGTTTGCCATACACAAGCTTCAAATATTCGGGGTTATGTTATTAATCTTGATCCTGCTGTTCTGACCCTCCCATTCGGCGCTAATATTGATATAAGGGACACTGTTCGATACAAAGAAGTAATGAAGCAGTTCAATCTTGGTCCCAATGGAGGAATACTGACATCACTTAACTTGTTTGCTACAAAGTTTGACGAGGTTGTTTCAATGATTGAGAAGCGAGCGGATCAGCTTGATTATGTTCTGGTAGACACACCTGGTCAAATTGAGATATTCACTTGGTCTGCCTCTGGAGCAATAATAACTGAAGCTTTTGCTTCAACCTTTCCTACCGTAATTACTTATGTAGTTGACACACCTCGCTCAGCAAGCCCAGTTACTTTTATGAGCAATATGCTTTATGCTTGTAGCATTCTGTACAAGACACGGTTGCCTTTGGTGTTGGCATTCAACAAAGTCGACGTTGCTCAACATCAGTTTGCTTTGGAGTGGATGGAAGATTTTGAGGTTTTTCATGCAGCCCTAGACTCAGATCACTCATACACATCTACTCTGACTCGGAGCCTCTCCCTTGTGCTGGATGAATTCTATAAGAATCTACAATCAGTTGGAGTATCTGCAGTTTCTGGTGCTGGAATGGAAGAATTCTTTAAGGCCATTGAAGCAAGTGCTGAGGAGTACATGACAAGTTATAAAGCTGACCTTGATAAGAGACGGGCAGAGAAACAGCGACTGGAGGAAGAACGAATGCGGGAGAACATGGATAGACTAAGGAAGGACATGGAGAAGTCTGGGGGAGAAACCATGGTTTTGAGCACTGGTTTGAAGGACAAAAATGCTGGCGGCAAGACCACAATGGATGAGGAGGATGAAGGAGAGGAAGAGGAAGAGGAAGATGAAGACGATTATGTGAGGTCCAGTGAGGAGGAGGATGTTATAGACGAAGATGAGGATGAAGAGGTTGGCCGATTTTCACTTTAA 1239 0.435 MDIDSDFRNLNLKSPEDDAPMQMDAAESAHIKGKEKEDISESLEKLHIEESSSGSAGSSSISFKRKPVIIIVVGMAGSGKTTFLHRLVCHTQASNIRGYVINLDPAVLTLPFGANIDIRDTVRYKEVMKQFNLGPNGGILTSLNLFATKFDEVVSMIEKRADQLDYVLVDTPGQIEIFTWSASGAIITEAFASTFPTVITYVVDTPRSASPVTFMSNMLYACSILYKTRLPLVLAFNKVDVAQHQFALEWMEDFEVFHAALDSDHSYTSTLTRSLSLVLDEFYKNLQSVGVSAVSGAGMEEFFKAIEASAEEYMTSYKADLDKRRAEKQRLEEERMRENMDRLRKDMEKSGGETMVLSTGLKDKNAGGKTTMDEEDEGEEEEEEDEDDYVRSSEEEDVIDEDEDEEVGRFSL* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g0055 412 Pfam Conserved hypothetical ATP binding protein 72 310 IPR004130 -
Vvi5g0055 412 CDD GPN1 68 308 IPR030230 GO:0003924
Vvi5g0055 412 Gene3D - 67 325 IPR027417 -
Vvi5g0055 412 FunFam GPN-loop GTPase 1 67 325 - -
Vvi5g0055 412 MobiDBLite consensus disorder prediction 344 412 - -
Vvi5g0055 412 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 69 307 IPR027417 -
Vvi5g0055 412 Coils Coil 314 353 - -
Vvi5g0055 412 PANTHER XPA-BINDING PROTEIN 1-RELATED 71 329 IPR004130 -
Vvi5g0055 412 MobiDBLite consensus disorder prediction 1 40 - -
Vvi5g0055 412 MobiDBLite consensus disorder prediction 373 412 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g0055 K24104 - vvi:100249973 733.791