Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g0050 ATGAGATCGTCTGTGTTTCTTCTCTGTGTCGTGAGTCTTTCTCTGACACAAATCCAATTCTCCAGAGCAGATTTGGTGGACCAAACGTGCAAGCAGACACCCAACTACGATCTCTGTGTGAAGACTCTCCGCGCAGACCCACGAAGCTCTACGGCTGACGTCACAGGCTTGGCCCTGGTGACGGTGGATGCAATCAAGGCCAAAGCGACCGCCACCCTCGATAGAATCAATGGATTATTGGGCACGACCCCAGACCCGAAAACGAAGGCGGCCTTGAGCCATTGTGGGGAGTTGTATGATAATGCAGTTCTGAAGGCTGATATTCCATCAGCCATAGAAGCTCTCAAGAAGGGTAATCCCAAATTTGCAGAACAAGGAGTTAATGATGCTGCTAACGAGGCCGACTCCTGCGAGAGAGCCTTTGGCGGGGCTTCCCCCATTACCTCTTTCAATAGGAGTGTCAGTGACCTCTCTCGTGTGGCTTCTGCCATTATCGGGCTCTTGTCGTGA 510 0.5176 MRSSVFLLCVVSLSLTQIQFSRADLVDQTCKQTPNYDLCVKTLRADPRSSTADVTGLALVTVDAIKAKATATLDRINGLLGTTPDPKTKAALSHCGELYDNAVLKADIPSAIEALKKGNPKFAEQGVNDAANEADSCERAFGGASPITSFNRSVSDLSRVASAIIGLLS* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g0050 169 FunFam Invertase/pectin methylesterase inhibitor family protein 21 169 - -
Vvi5g0050 169 Gene3D Invertase/pectin methylesterase inhibitor family protein 21 168 IPR035513 -
Vvi5g0050 169 SMART PMEI_2 21 164 IPR006501 GO:0004857
Vvi5g0050 169 PANTHER PECTINESTERASE INHIBITOR-LIKE 3 169 - -
Vvi5g0050 169 CDD CIF_like 23 168 IPR034087 GO:0004857|GO:0043086
Vvi5g0050 169 NCBIfam pectinesterase inhibitor domain 4 167 IPR006501 GO:0004857
Vvi5g0050 169 Pfam Plant invertase/pectin methylesterase inhibitor 24 164 IPR006501 GO:0004857
Vvi5g0050 169 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 23 168 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g0050 Vvi-Chr5 476921 477430 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g0050 - - vvi:100256859 293.893