Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g0049 ATGAGATCATCTGTGTTTCTCCTGTGTGTAATGGGTCTTTCTCTGACCCAAATCGAATTCTCCACTTCAGATTTGGTAAAGCAAACATGCAAGCATACACCCAACTACGATCTCTGTGTGAAGACTCTGCTCTCAGACCCACGAAGCTCTCACGCAGACGTCGCAGGTTTGGCCATGGTGATGGTGGACGTGATCAAGGCCAAAACAATCGCCACCCTCCACAGAATCAGCGAATTGCTGGGCACAACCCGATACCCAAAAACGAAGGCTGCCTTGAGGCGTTGTGTAGAGTTGTATGATAATGCAGTTTTGAAGGCTGATCTTCCATCAGCGATGCAAGCTCTCAAGACTGGTGTTCCCAAATTTGCAGAAGAAGGTACTAATGATGCTGCTAACGAGGCCGACTCCTGCGAGAGAACCTTCAGTGGGGCATCCCCCATTACCTCTTTCAATAGGTATGTCAGTGACCTCTGTCGTGTGGCTTCTGCCATTATCAGGCTCTTGTTGTGA 510 0.4882 MRSSVFLLCVMGLSLTQIEFSTSDLVKQTCKHTPNYDLCVKTLLSDPRSSHADVAGLAMVMVDVIKAKTIATLHRISELLGTTRYPKTKAALRRCVELYDNAVLKADLPSAMQALKTGVPKFAEEGTNDAANEADSCERTFSGASPITSFNRYVSDLCRVASAIIRLLL* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g0049 169 SMART PMEI_2 21 164 IPR006501 GO:0004857
Vvi5g0049 169 Gene3D Invertase/pectin methylesterase inhibitor family protein 21 169 IPR035513 -
Vvi5g0049 169 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 23 168 IPR035513 -
Vvi5g0049 169 FunFam Invertase/pectin methylesterase inhibitor family protein 21 169 - -
Vvi5g0049 169 NCBIfam pectinesterase inhibitor domain 5 168 IPR006501 GO:0004857
Vvi5g0049 169 PANTHER OS02G0537100 PROTEIN 3 168 - -
Vvi5g0049 169 CDD CIF_like 23 168 IPR034087 GO:0004857|GO:0043086
Vvi5g0049 169 Pfam Plant invertase/pectin methylesterase inhibitor 24 164 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g0049 Vvi-Chr5 475375 475884 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g0049 - - vvi:100256859 300.827