Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g0037 ATGAATTCTGGGGTTTTCCCAGAAGAGGTTATTCTTCAAATACTTGCAAGATTGCCTGTGAAATCAGTCTTCAGAAGCAAATGTGTGTGCACACTTTGGTATAAATTGTGTTCTGATAAGTATTTTGTTAGAGCCTCGTGTAATGGTTTGTTGTGTTGCTCTAGCATACCTGATAAGGGTGTTTACTATGTAATTAATCCTGAGACCAGAGAGTATAGGTTGCTTCCTAAGAGTAGGGAAAGGCCTGTGACTAGATTTTATCCAGATGGAGAAGCCACTCTAATTGGTTTGGCTTGTGATTTATCGGGTCAGAAGTATAATGTAGTGCTAGCGGGTAATCACCGATGTTTCGGTCAGAGGCCGGAGAAGATGTTTATATGTTTGGTATTTGATTCTGAGTCGAACAAATGGAGAAAATTTGTGTCCTTGCAGGATGAGCAATTTACACATATGAATAAGAACCAAGTTGTGTTTCTGAATGGTTCACTTCATTGGTTGACAGCGAGTTGTTCTTGTGTGCTTGCACTTGACTTGGATGGTGAGGTTTGGAAGAAGATCAAGCTGCCAGATGAAGTGGGTTATGGGTCGGGAAATAGGGTTTATTTGTTGGATTATGATGGGTGTCTGTCAGTGATTCAGATTTCGGATGCTTCGATGAATATTTGGGTGTTGAAAGATTATGAGATGGGGGAATGGAACTTGGTGGACAGGGTCAGTCTTCAGTGTATTAGAGGACTGGTGCCTGGTGTTTTCCCAATAAGTCAGACCGGTGAATATGTTTTCTTTGCAACCTATAAGCAGGTATTGGTGTATCGTCGGAATGGTGGGGTGTGGAAAGAGATGTACTCTGTCAAGGGCTCCTTTCCACTGCCATTGTGGTTCTCAGCACATGCCTTTCGGAGATCATTATTCTCTTCTTTGTCTGGGATCTTCTCATCTTACCATGGTTAA 951 0.4196 MNSGVFPEEVILQILARLPVKSVFRSKCVCTLWYKLCSDKYFVRASCNGLLCCSSIPDKGVYYVINPETREYRLLPKSRERPVTRFYPDGEATLIGLACDLSGQKYNVVLAGNHRCFGQRPEKMFICLVFDSESNKWRKFVSLQDEQFTHMNKNQVVFLNGSLHWLTASCSCVLALDLDGEVWKKIKLPDEVGYGSGNRVYLLDYDGCLSVIQISDASMNIWVLKDYEMGEWNLVDRVSLQCIRGLVPGVFPISQTGEYVFFATYKQVLVYRRNGGVWKEMYSVKGSFPLPLWFSAHAFRRSLFSSLSGIFSSYHG* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g0037 316 PANTHER F-BOX PROTEIN INTERACTION DOMAIN PROTEIN-RELATED 6 265 - -
Vvi5g0037 316 Gene3D - 6 42 - -
Vvi5g0037 316 SMART fbox_2 6 46 IPR001810 GO:0005515
Vvi5g0037 316 SUPERFAMILY YWTD domain 57 294 - -
Vvi5g0037 316 Pfam F-box domain 7 42 IPR001810 GO:0005515
Vvi5g0037 316 NCBIfam F-box protein interaction domain 46 265 IPR017451 -
Vvi5g0037 316 Pfam F-box associated domain 159 262 IPR013187 -
Vvi5g0037 316 SUPERFAMILY F-box domain 5 48 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g0037 Vvi-Chr5 379511 380758 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g0037 - - vvi:100249860 594.349