Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g0036 ATGCAAAAAAAGAAAAAAATGGCATCTGGAGCTGGTGTAATGACCCTAGTTCTATTCATTCTCTGTCTCGTATCTCATGGCTCCTTTGTTGCAGGCATTAAAGCAGAATCTTCCCAAGAGAATGATAGAATCATAAATCTACCAGGCCAGCCATCAAGTCCACCCATCACCCAGTTCTCTGGGTACATCACAGTGAATAAAGCTCATGGGAGGGCCCTCTTCTATTGGTTCTTTGAAGCTCAATCTCAACCCTCTAACAGGCCTCTCCTTCTGTGGCTTAATGGAGGTCCTGGTTGTTCTTCAATCGGGTATGGTGCAGCTGTGGAGTTGGGTCCTCTCAGAGTGAGTAAAAATGGGGATGGCCTTCACTTCAATGACTTTGCTTGGAATAAAGAGGCCAATTTGCTGTTTGTGGAATCCCCAGTGGGAGTTGGGTTCTCTTACACTAACACATCCTCTGATCTCACCAAGTTGACTGATGGATTTGTGGCTGAGGATGCCTACAATTTCTTGGTGAATTGGCTGAAAAGATTTCCACAGTACAAAGCCCATGATTTCTTCATCTCAGGAGAGAGCTATGCAGGTCACTATGTGCCTCAGCTGGCAGAGCTTGTGTATGACCGCAACAAAGATAGAACTAAATATCCTCTAATTAATCTCAAAGGTTTCATAGTGGGAAATCCAGAAACAAATGACTACTACGACTATAAGGGTTTGTTGGAATATGCATGGAGCCATGCTGTAATATCAGACCAGCTCTACTACAAATCCAAACAAGTCTGTGATTTCAAGGTGGCCGACTGGTCTTCTGAATGCATCACCAACATGAATAAAGTCTTTGATGATTACAGAGAGATTGACATTTACAACATCTATGCTCCATCCTGTCTCCTCAACACCACTTCTTCCTCAGCTGAGTTGAATGGTAATGGGTTTAGGAGAATGAGAGTCCCTGGAGGCTACGACCCTTGTTTTTCTATCTACGCAGCAGAGTATTTCAACAGGCCTGATGTGAAGCTTGCCCTCCATGCCGCCACCCATACAAAATGGGAGGTTTGCAGTGATTCTGTCTTCCACGCATATCATTATACTGTTTTTTCTGTTCTACCAATCTACACCAAGCTCATCAAAGCTGGCCTCAGAATTTGGGTTTACAGGTACTTCTTCTCTTTCAATCTTTTTTTTTTAGAAAAAAAAAAAAATTTAGAAAAATCTGGAGTAAAACATCGTGCATGA 1236 0.4272 MQKKKKMASGAGVMTLVLFILCLVSHGSFVAGIKAESSQENDRIINLPGQPSSPPITQFSGYITVNKAHGRALFYWFFEAQSQPSNRPLLLWLNGGPGCSSIGYGAAVELGPLRVSKNGDGLHFNDFAWNKEANLLFVESPVGVGFSYTNTSSDLTKLTDGFVAEDAYNFLVNWLKRFPQYKAHDFFISGESYAGHYVPQLAELVYDRNKDRTKYPLINLKGFIVGNPETNDYYDYKGLLEYAWSHAVISDQLYYKSKQVCDFKVADWSSECITNMNKVFDDYREIDIYNIYAPSCLLNTTSSSAELNGNGFRRMRVPGGYDPCFSIYAAEYFNRPDVKLALHAATHTKWEVCSDSVFHAYHYTVFSVLPIYTKLIKAGLRIWVYRYFFSFNLFFLEKKKNLEKSGVKHRA* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g0036 411 Gene3D - 322 386 - -
Vvi5g0036 411 FunFam Carboxypeptidase 38 298 - -
Vvi5g0036 411 ProSitePatterns Serine carboxypeptidases, serine active site. 188 195 IPR018202 GO:0004185
Vvi5g0036 411 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 45 377 IPR001563 GO:0004185|GO:0006508
Vvi5g0036 411 PRINTS Carboxypeptidase C serine protease (S10) family signature 125 137 IPR001563 GO:0004185|GO:0006508
Vvi5g0036 411 PRINTS Carboxypeptidase C serine protease (S10) family signature 174 199 IPR001563 GO:0004185|GO:0006508
Vvi5g0036 411 PRINTS Carboxypeptidase C serine protease (S10) family signature 138 148 IPR001563 GO:0004185|GO:0006508
Vvi5g0036 411 Gene3D alpha/beta hydrolase 38 298 IPR029058 -
Vvi5g0036 411 SUPERFAMILY alpha/beta-Hydrolases 39 385 IPR029058 -
Vvi5g0036 411 Pfam Serine carboxypeptidase 48 385 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g0036 Vvi-Chr5 372835 375456 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g0036 K16297 - vvi:100263750 803.512