Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g0035 ATGGCGTTCTTAGCTTTGTTTGTATCTGCGACGAAGTTCGCCGGTGTTTTGGTTACTCTCTCCGTCGCCGCCAACGCCTTTTCATTCTCTCGTTACCGGAGGAAGAATCTCCAGCCCTTCCGGTCACCTATCGACGAATCGTCTGAGACGCTGGCCGTCTTCAATGTTGATCCCAGCACTGACGGAGAAAAGGAGTTCTTCTTTGGATTGGCGACAGCACCAGCACATGTTGAAGATAGGCTTGATGATGCTTGGCTCCAATTTGCAGAAGAACACCCTTGTGACAAATCAGAGTCGCAGCAGGGCTCACAACCATCAGATGCACTAATTGCATCAGCTAGTGGTGATGGTGGTTCTCACCTAGCTTCATCATCTTCAATGGAAGCTGCTGAGAGAGTGAAGAAAAAGAAACCTCTTAAGATAGCTATGGAAGCCATGATTAGAGGGTTTGAAAAATACATTGAAGAAGAAGAACATGCAACAAATGATGAATGCCATCACAATGTAGCTGCTTGGCACAATGTTCCACACCCGGAGGAGAGGCTAAGGTTTTGGTCTGATCCTGATACTGAATTGAAACTGGCTAAGGATACTGGTGTCCGTGTGTTCCGGATGGGAATAGATTGGACTAGGGTCATGCCAAAGGAGCCACTTAATGGACTAAAAGAAAGTGTTAACTATGCGGCATTGGAACGATACAAGTGGATCATCAATAGGGTTCACTCATATGGAATGAAAGTGATGCTGACCCTATTCCATCACTCATTGCCACCATGGGCTGGAGAGTACGGAGGATGGAAACTGGAAAGAACTGTTGATTATTTCATGGATTTTACCAGGCTGGTTGTTGATAGTGTATCAGATATGGTAGACTACTGGGTAACATTTAATGAGCCTCATGTCTTCTGTTTGCTAACATATTGTGCGGGTGCCTGGCCTGGTGGTCATCCTGATATGTTGGAAGTTGCCACTTCTGCTCTGCCAGCTGGTGTTTTCAAACAGGCCATGCATTGGATGGCGATTGCACACTCAAAGGCTTTTGAGTATATCCATGAGAAAAGCAGCGGCTTATCAAAGCCATTGGTTGGAGTAGCACACCATGTCTCATTTATGCGGCCGTATGGTCTTTTTGACGTTGCTGCTGTTACACTGGCCAACTCATTAACCATCTTCCCATATGTGGATAGTATTTCCAATCAGCTGGATTTCATAGGAATAAACTACTACGGACAGGAAGTTGTCTCTGGTGCTGGACTGAAGCTGGTAGAGACTGATGAATATAGTGAATCTGGAAGAGGGGTATATCCCGATGGCTTGTATCGCATGCTGCTTCAGTTCCATGAAAGATACAAACATCTAAATATACCCTTCATCATTACAGAGAATGGGGTGTCTGATGAGACAGATTTGATTCGGCGGCCATATTTGCTAGAACATTTACTTGCAGTTTATGCAGCTATGATCAAGGGTGTCCCAGTGCTTGGTTACCTGTTTTGGACTATTTCTGATAACTGGGAGTGGGCAGATGGATATGGTCCTAAGTTTGGACTTGTAGCTGTGGATCGTGCCAATAATCTTGCCCGCATTCCCCGTCCTTCATACAATCTATTTTCCAAAGTGGTGGCTACTGGTAAAGTCACACGTCTAGACAGGGTGCATGCATGGAATGAACTCCAGAGAGCTGCTAAAGAGAAAAAAACACGACCATTTTATCGAGCAGTTAATAAAGATGGTTTAATGTATGCAGGAGGCCTTGATGAACCTATACATCGCCCTTACATCCAACGGGATTGGCGGTTTGGACACTATGAGATGGAAGGTCTCCACGACCCGCTAAGCACATTCTCAAGATACATCCTCAGTCCTTTCTCCCTCGGAAGGAAAAGGAAGCCGCAAAGAGACGATAATGACGATTTGGTTCTTGAGCCTCTTGAATTAAGCTTCTGA 1947 0.4535 MAFLALFVSATKFAGVLVTLSVAANAFSFSRYRRKNLQPFRSPIDESSETLAVFNVDPSTDGEKEFFFGLATAPAHVEDRLDDAWLQFAEEHPCDKSESQQGSQPSDALIASASGDGGSHLASSSSMEAAERVKKKKPLKIAMEAMIRGFEKYIEEEEHATNDECHHNVAAWHNVPHPEERLRFWSDPDTELKLAKDTGVRVFRMGIDWTRVMPKEPLNGLKESVNYAALERYKWIINRVHSYGMKVMLTLFHHSLPPWAGEYGGWKLERTVDYFMDFTRLVVDSVSDMVDYWVTFNEPHVFCLLTYCAGAWPGGHPDMLEVATSALPAGVFKQAMHWMAIAHSKAFEYIHEKSSGLSKPLVGVAHHVSFMRPYGLFDVAAVTLANSLTIFPYVDSISNQLDFIGINYYGQEVVSGAGLKLVETDEYSESGRGVYPDGLYRMLLQFHERYKHLNIPFIITENGVSDETDLIRRPYLLEHLLAVYAAMIKGVPVLGYLFWTISDNWEWADGYGPKFGLVAVDRANNLARIPRPSYNLFSKVVATGKVTRLDRVHAWNELQRAAKEKKTRPFYRAVNKDGLMYAGGLDEPIHRPYIQRDWRFGHYEMEGLHDPLSTFSRYILSPFSLGRKRKPQRDDNDDLVLEPLELSF* 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g0035 648 PRINTS Glycosyl hydrolase family 1 signature 457 465 IPR001360 GO:0004553|GO:0005975
Vvi5g0035 648 PRINTS Glycosyl hydrolase family 1 signature 469 480 IPR001360 GO:0004553|GO:0005975
Vvi5g0035 648 PRINTS Glycosyl hydrolase family 1 signature 514 526 IPR001360 GO:0004553|GO:0005975
Vvi5g0035 648 PRINTS Glycosyl hydrolase family 1 signature 400 414 IPR001360 GO:0004553|GO:0005975
Vvi5g0035 648 PRINTS Glycosyl hydrolase family 1 signature 490 507 IPR001360 GO:0004553|GO:0005975
Vvi5g0035 648 PANTHER GLYCOSYL HYDROLASE 154 393 IPR001360 GO:0004553|GO:0005975
Vvi5g0035 648 MobiDBLite consensus disorder prediction 92 129 - -
Vvi5g0035 648 Pfam Glycosyl hydrolase family 1 189 375 IPR001360 GO:0004553|GO:0005975
Vvi5g0035 648 Pfam Glycosyl hydrolase family 1 395 543 IPR001360 GO:0004553|GO:0005975
Vvi5g0035 648 Gene3D Glycosidases 143 554 - -
Vvi5g0035 648 SUPERFAMILY (Trans)glycosidases 167 546 IPR017853 -
Vvi5g0035 648 ProSitePatterns Glycosyl hydrolases family 1 active site. 457 465 IPR018120 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi5g0035 4 620 Glycoside Hydrolase AT3G06510 62.787 0.0 848
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g0035 K21362 - vvi:100241487 1334.32