Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g0033 ATGGTGGTGGCCTCTCCAACCCCAATTGGAAGTGAGAAGCTCATAGCTGTGGAGGTTCCAATAATAGACCTCGCAGCTAGGGGACCGAAGGTAGCAGAGCTGATAGTGAAAGCTAGTCAAGAGTTTGGTTTCTTCAAGGTGATCAACCATGGAGTTCCTGAGGATGTGATCAGGAAGATGGAAGAAGAGAGTTTTAACTTCTTTGGGAAACCAGACTCAGAGAAGAAGAAAGCTGGGCCAGCACAGCCATTTGGCTATGGCTGCAAGAACATAGGGTTTAATGGTGATATGGGTGAGGTTGAATACCTTCTGTTCAACACCAACCCTCACTGCATTTCTCAGAGATCAGAAACTATCTCCAATGACCCAACAAAGTTCAGCTCTGCTGTGAGTGGTTACATACAAGCAGTTACAGATCTGGCATGTGAAATTTTGGATCTGATGGCAGAGGGATTGTGGGTCCAGAACACTTCAGTCTTCAGCAGCCTCATCACACATCTTGACAGTGACTCAGTCTTCAGGCTCAATCACTATCCTCCTCCTCTTAAGGACAGGGACACTTCACCTTCTTCCTCATTTCAGATTCATCATCAGGGCAACAACATTGGATTTGGAGAGCATTCTGATCCTCAGATCCTGACCATCTTGAGATCCAACGATGTGGGTGGCCTCCAAATTTGTCTGGGAGACGGGGTTTGGGTCCCAGTCCCCCCTGACCCCACCAGCTTCTGTGTTAACGTGGGGGACTTGTTGCAGGCCATGACAAATGGGAGGTTTGTGAGCGTGAGACACAGAGCCTTGACCAATTCAGACAAGCCCAGAATGTCAATGGCCTTTTTTGGAGCTCCACCTCTTCATGCATTGATCACTTCTCCCCCAGAGGTGGTCACACCTGAGAGGCCTTCTCTTTACAGGCCATTCACTTGGGCTGAATACAAGGAAATTACATACTCTCTACGGCTCGGGGACAGTCGTCTGAACCTTTTCAAAGCCTGCCCAGACAAGGAAGCTCAAGAGTGA 1020 0.4853 MVVASPTPIGSEKLIAVEVPIIDLAARGPKVAELIVKASQEFGFFKVINHGVPEDVIRKMEEESFNFFGKPDSEKKKAGPAQPFGYGCKNIGFNGDMGEVEYLLFNTNPHCISQRSETISNDPTKFSSAVSGYIQAVTDLACEILDLMAEGLWVQNTSVFSSLITHLDSDSVFRLNHYPPPLKDRDTSPSSSFQIHHQGNNIGFGEHSDPQILTILRSNDVGGLQICLGDGVWVPVPPDPTSFCVNVGDLLQAMTNGRFVSVRHRALTNSDKPRMSMAFFGAPPLHALITSPPEVVTPERPSLYRPFTWAEYKEITYSLRLGDSRLNLFKACPDKEAQE* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g0033 339 PRINTS Isopenicillin N synthase signature 243 269 - -
Vvi5g0033 339 PRINTS Isopenicillin N synthase signature 35 52 - -
Vvi5g0033 339 PRINTS Isopenicillin N synthase signature 207 228 - -
Vvi5g0033 339 Pfam non-haem dioxygenase in morphine synthesis N-terminal 19 84 IPR026992 -
Vvi5g0033 339 SUPERFAMILY Clavaminate synthase-like 16 323 - -
Vvi5g0033 339 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 19 314 - -
Vvi5g0033 339 Gene3D - 5 319 IPR027443 -
Vvi5g0033 339 Pfam 2OG-Fe(II) oxygenase superfamily 170 281 IPR044861 -
Vvi5g0033 339 FunFam Gibberellin 2-beta-dioxygenase 2 3 320 - -
Vvi5g0033 339 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 168 283 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g0033 Vvi-Chr5 344130 346779 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi5g0033 17 330 Glycosyltransferase AT5G59530 30.581 1.81e-33 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g0033 K04125 - vvi:100258599 687.182