Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g0032 ATGAACTCGAGCAGTTATATTGGAATTACGACCATGAAACCCTACTGTAGAGTTCTAACCAGCTGTAGGAATTCCTCCATTTTCAAATTCCCATCTTCAAAATCAAACCATTTCATTGCTGATAATTCGTCGAAATTTCAATCCAAGTTGATCCATAGCCGGAGATTCCACTGTTGTAGCGCTCAAATTCTGGGTAAGAAATGTGGAATCAATTCGAATCGGAGGGCTTTTCGGTTGTCCGATCCGAATTGGGGCCAAATTAGGGTTTACAGAAGTTGTAGTGGTGCTCATGGAGGTAGGAGAGGTGTTTTGGTGATCTCGAATGTGGCGTCGGATTTTAGGAAGCATTCGACGTCGGTGGAGAGTCATGTGAATGAGAAGGGGTTTGAGAGCATTTATATCAATGGTGGATTGAATGTGAAGCCATTGGTGATTGAAAGAATTGAGAGGGGTCATGTAGAGGAGGAGTCGGGCTTAGAATTTAAGGACCCGGATGTGAATTTTGATCATTCAGAGGGTTTGAATAAGGAAAAGGTTGAGAGAGAGGTGCCCGAGATTGAAAAAGAGGCATGGAGGCTGTTGAGAAGTGCAGTTGTGGATTACTGTGGAAATCCGGTGGGGACTGTTGCAGCTAATGACCCAGGGGATAAGCAACCGCTGAATTATGATCAGGTCTTTATTCGGGATTTTGTCCCATCAGCGCTTGCATTCTTGCTTAAAGGAGAGGGAGAGATTGTGAAGAATTTTCTCCTTCATACATTACAGTTACAGAGTTGGGAGAAGACTGTGGACTGCTACAGCCCTGGGCAAGGGTTGATGCCAGCAAGTTTTAAAGTTAGAACTGTGCCTCTTGATGGCGGCAATGGAGCATTTGAGGAAGTTTTGGATCCTGATTTTGGTGAATCAGCGATTGGGCGTGTTGCCCCTGTTGATTCTGGGTTGTGGTGGATCATTTTGTTGAGAGCTTATGGAAAGATCACGGGTGACTATGCATTGCAAGAAAGAGTAGATGTCCAGACAGGCATAAGACTGATCCTTAATTTATGTTTAACTGATGGGTTTGACATGTTCCCTTCTCTTTTAGTCACTGATGGTTCCTGCATGATTGATAGACGCATGGGTATTCACGGCCACCCTCTTGAAATCCAAGCCTTATTCTATTCAGCACTACGTTGCTCCCGTGAGATGATCACTGTCAATGATGGAACCAAGAATTTGGTGAGGGCCATCAACAACCGATTAAGTGCCCTGTCATTTCATATCCGAGAGTATTATTGGGTGGATATGAAGAAGATCAATGAGATATATCGTTACAAGACAGAGGAATACTCTACAGATGCCATCAACAAGTTCAACATTTATCCGGATCAAATTCCTACCTGGCTGGTAGATTGGATACCTGACCAAGGTGGCTATCTTATTGGCAATCTACAACCTGCACATATGGATTTCAGATTTTTCACCCTTGGAAATCTTTGGTCCATTATATCATCTTTGGGTACTGCCAAACAGAATGAGGGTATTCTGAATTTAATTGAAGCCAAATGGGATGATCTTGTGGCACATATGCCTCTTAAAATATGTTACCCTGCTCTAGAGAATGAGGAATGGCGTATAATCACTGGCAGTGACCCAAAAAACACGCCATGGTCATATCATAATGGTGGATCTTGGCCAACACTCCTGTGGCAGTTCACATTGGCCTGCATTAAGATGGGAAGGCCAGAATTAGCAAGAAAGGCAGTTGCTTTAGCTGAAGAGAGACTTTCAGTAGACCACTGGCCTGAATATTATGACACACGAAATGGGCGGTTCATAGGCAAGCAGTCACGGCTCTACCAAACATGGACAATTGCTGGATTCCTGACTTCAAAGATGCTCTTGGAAAACCCAGAGATGGCGTCCCTGTTGGCTTGGGAAGAGGACTATGAGCTCCTTGAGATTTGTGTCTGCGCACTTAGCAAAACCGGTCGAAAGAAGTGCTCACGCAGTGCTGCAAGATCCCAGATTCCCGTCCAGTGA 2022 0.4436 MNSSSYIGITTMKPYCRVLTSCRNSSIFKFPSSKSNHFIADNSSKFQSKLIHSRRFHCCSAQILGKKCGINSNRRAFRLSDPNWGQIRVYRSCSGAHGGRRGVLVISNVASDFRKHSTSVESHVNEKGFESIYINGGLNVKPLVIERIERGHVEEESGLEFKDPDVNFDHSEGLNKEKVEREVPEIEKEAWRLLRSAVVDYCGNPVGTVAANDPGDKQPLNYDQVFIRDFVPSALAFLLKGEGEIVKNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRTVPLDGGNGAFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIRLILNLCLTDGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYSALRCSREMITVNDGTKNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYSTDAINKFNIYPDQIPTWLVDWIPDQGGYLIGNLQPAHMDFRFFTLGNLWSIISSLGTAKQNEGILNLIEAKWDDLVAHMPLKICYPALENEEWRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACIKMGRPELARKAVALAEERLSVDHWPEYYDTRNGRFIGKQSRLYQTWTIAGFLTSKMLLENPEMASLLAWEEDYELLEICVCALSKTGRKKCSRSAARSQIPVQ* 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g0032 673 Gene3D - 221 622 IPR012341 GO:0005975
Vvi5g0032 673 PANTHER - 125 657 IPR024746 GO:0033926
Vvi5g0032 673 FunFam probable alkaline/neutral invertase B 216 624 - -
Vvi5g0032 673 SUPERFAMILY Six-hairpin glycosidases 190 623 IPR008928 GO:0005975
Vvi5g0032 673 Pfam Alkaline and neutral invertase 190 631 IPR024746 GO:0033926
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g0032 Vvi-Chr5 339587 343282 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g0032 - - vvi:100233037 1373.99