Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi5g0026 | ATGAAAGCCTTCCACTGGGGCAAGGATGTGAGCATTGAGAACATGCATCAAGGTTTCACTCATGTTTTCGAGTCCACCTTCGAGAGCGTGGAAGGCATGGCAGAGTACGTATCTCATCCAGCCCACGTCGAAGCTGCAAATCGGTTCCTGCCCCACCTGGAGAAAGTCATTGTTTTGGACTACAAGCCCACTGCAGTCCATCTCTGA | 207 | 0.5121 | MKAFHWGKDVSIENMHQGFTHVFESTFESVEGMAEYVSHPAHVEAANRFLPHLEKVIVLDYKPTAVHL* | 69 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi5g0026 | 68 | Pfam | Stress responsive A/B Barrel Domain | 1 | 62 | IPR013097 | - | |
| Vvi5g0026 | 68 | ProSiteProfiles | Stress-response A/B barrel domain profile. | 1 | 61 | IPR013097 | - | |
| Vvi5g0026 | 68 | SUPERFAMILY | Dimeric alpha+beta barrel | 1 | 66 | IPR011008 | - | |
| Vvi5g0026 | 68 | SMART | Dabb_2 | 1 | 63 | IPR013097 | - | |
| Vvi5g0026 | 68 | PANTHER | - | 1 | 65 | IPR044662 | - | |
| Vvi5g0026 | 68 | Gene3D | - | 1 | 68 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vvi5g0026 | Vvi-Chr5 | 247677 | 248137 | Dispersed/Tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vvi5g0026 | - | - | vvi:100261862 | 145.206 |