Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g0018 ATGATGCATACGGTTAGAGAGAGCAACAACAATCGTCAAAGCAAGCAGTTGAGCTACTCGGATACTAATAGAGAGGTTCCATTCCAGGTCCCAGTCAAAGTAAACATAGTCCTCATTGGTTTCAATAATGATGGAGGCTATAGGTATATGGTTGATGCACACAAATTGGAAGAGTTCCTAAGAATCAGCTTCCCATCTCACAGACCCTCATGCTTGGAGACAGGTGAGCTCCTTGATATTGAGCATCACATCGTCTACAATGTGTTTCCTGCTGGGCAACCAGAGCTGATAGCACTGGAGAAGGCACTGAAAGAGGCCATGGTTCCTGCTGGAACTGCTAGAGAGTCTGATTATGGAAGGGAGGTGCCGTTGTTTGAGGTGGATGCAACAGCTGTGGAGTCTGTATTTCAGAAACTATATTCCTACATATTTGACATGGATAATAGTGGATACAATGCAGCAGAGATGGATAGACCTGTGCCAAGTGCAATTTTTATTGTCAATTTCGATAAGGTGAGAATGGATCCTAGGAACAAGGAGATTGATCTCGACAGTTTAATGTATGGAAAAATTACCCAGCGAACTGAGGAAGAGATGAAAAGACAGGAGGGGGAATACATTTATCTCTTGTTGGACATAAGATTGAGTGCACCATATGAAAAGGCTTCTCATGTACATGAAAGATCGATCGTGAATTGGCTCTGGTCAGCTGGTTGTCATCCATTTGGACCATTCTCCAATACTTCCCAGATGAGTCAAATGCTCCAGGATGTTGCCTTGAGGAACACGATATACGCTCGTGTAGATTCTGCACTACACAGAATTCGGGATACATCAGAGTATGTACAAACTTTTGCTGCTGAATATCTGAAAACCCCACTTAGTGAACCAGTCAAGGGCAAGAAAAATAAGTCGAGCACTGAGCTATGGTTGGAAAAGTTCTACAAGAAGAAAACTAACTTGCCTGAACCTTTACCTCACGAATTAGTTGAAAGACTAGAGAAATTCTTGGATAACCTTGAGGAAGAACTTGTAGATCTATCATCCCTGTTATACGATCATCGGTTACAAGATGCACACCTGAACAGCTCATAA 1095 0.4247 MMHTVRESNNNRQSKQLSYSDTNREVPFQVPVKVNIVLIGFNNDGGYRYMVDAHKLEEFLRISFPSHRPSCLETGELLDIEHHIVYNVFPAGQPELIALEKALKEAMVPAGTARESDYGREVPLFEVDATAVESVFQKLYSYIFDMDNSGYNAAEMDRPVPSAIFIVNFDKVRMDPRNKEIDLDSLMYGKITQRTEEEMKRQEGEYIYLLLDIRLSAPYEKASHVHERSIVNWLWSAGCHPFGPFSNTSQMSQMLQDVALRNTIYARVDSALHRIRDTSEYVQTFAAEYLKTPLSEPVKGKKNKSSTELWLEKFYKKKTNLPEPLPHELVERLEKFLDNLEEELVDLSSLLYDHRLQDAHLNSS* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g0018 364 PANTHER TRANSMEMBRANE PROTEIN-RELATED 215 354 - -
Vvi5g0018 364 Coils Coil 330 357 - -
Vvi5g0018 364 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g0018 Vvi-Chr5 149921 163901 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g0018 - - vvi:100249952 371.318