Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g0014 ATGAGTGTCATACAGGTTCCATTCCAGGTCCCACTCGAAGTAAACATAGTCCTTATTGGTTTCAACAATGATGGAGGCTATAGGTATACGGTTGATGCACACAAATTGGAAGAGTTCCTCAGAATCAGCTTCCCATCTCACAGACCCTCATGCTTGGAGACAAGCGAGCCCCTTGATATCGAGCATCACATCGTCTACAATGTGTTTCCTGCTGGGCAACCAGAGCTGATAGCACTGGAGAAGGCACTGAAAGAGGCCATGGTTCCTGCTGGAACTGCTAGAGAGTCTGATTATGGAAGGGAGGTGCCGTTGTTTGAGGTGGATGCAACAGCTGTGGAGCCTGTATTTCAGAAACTATATTCCTACATATTTGACATGGATAATAGTGGATACAATGCAGCAGAGATGGATAGACCTGTGCCAAGTGCAATTTTTATTGTCAATTTCGATAAGGTGAGAATGGATCCTAGGAACAAGGAGATTGATCTCGACAGTTTAATGTATGGAAAAATTACCCAGCTAACTGAGGAAGAGATGAAAAGACAGGAGGGGGAATACATTTATCGTTATCGATATAATGGAGGAGGGGCATCTCAAGTTTGGCTGCGTCTTGGAAGGTATAGTGAAAAAAGCTCATACAGAAAAAATTGGGTTTTGAAATTAATCATCAGAGAGGCTTTAATTATCTTTGTTCTATCATTGGCTGATGTCGATCCACACCTTATGATGGAAGATGAAAGTCTTGTATGGATAAGTAATGATGTTGTCATTGTGCTTCAGCATCAAAATGAAAAAATACCTCTAAGTTATGTTTCAGAAAGAGAGAGAAGGCATGCTATTCCATCACAAGCACAACGCCATATATTGGCAGGTCTTGCTTCTGCCGTGGGTGGGTTGAGTGCACCATACGAAAAGGCTTCTCATGTACATGAAAGACCGATCGTGAATTGGCTCTGGTCTGTTGGTTGTCATCCATTTGGACCATTCTCCAATACTTCCCAGATGAGTCAAATGCTCCAGGATGTTGCCTTGAGGAACGCAATATACGCTCGTGTAGATTCTGCACTACACAGAATTCGGGATACATCAGAGTATGTACAAACTTTTGCTGCTGAATATCTGAAAACCTCACTTGGTGAACCATCAAGGGCAAGAAAAATAAGTCGAGCACTGAGCTATGGTTGGAAAAGTTCTACAAGAAGAAAACTAACTTGCATGAACCTTTACCTCACGAATTAG 1239 0.4237 MSVIQVPFQVPLEVNIVLIGFNNDGGYRYTVDAHKLEEFLRISFPSHRPSCLETSEPLDIEHHIVYNVFPAGQPELIALEKALKEAMVPAGTARESDYGREVPLFEVDATAVEPVFQKLYSYIFDMDNSGYNAAEMDRPVPSAIFIVNFDKVRMDPRNKEIDLDSLMYGKITQLTEEEMKRQEGEYIYRYRYNGGGASQVWLRLGRYSEKSSYRKNWVLKLIIREALIIFVLSLADVDPHLMMEDESLVWISNDVVIVLQHQNEKIPLSYVSERERRHAIPSQAQRHILAGLASAVGGLSAPYEKASHVHERPIVNWLWSVGCHPFGPFSNTSQMSQMLQDVALRNAIYARVDSALHRIRDTSEYVQTFAAEYLKTSLGEPSRARKISRALSYGWKSSTRRKLTCMNLYLTN* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g0014 412 PANTHER TRANSMEMBRANE PROTEIN-RELATED 229 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g0014 Vvi-Chr5 113783 123729 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g0014 - - vvi:100249952 406.757