Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g0006 ATGTCTTTTTTTATTTTATTTTTTTTCAATGTTTTCTCTGAGGACTTTACCTTCCTTCTATTTCATTATGATGGTCGAACAACTGAATGGGATGAATTTGAGTGGTCAAAGAGGGCTATTCATGTGAGCGTTCGGAGACAAACAAAATGGTGGTATGCCAAAAGATTTCTGCATCCTGACATTGTGGCGCCATATGACTATATATTTATCTGGGATGAAGATCTAGGAGTTGAGCATTTTAATGCAGAAGAAAGTCCACGAAAACAGAGGAGAAACCGGGCTGGTGCCCTAACCCACATTTGCCTCCCTATGCAGCGTTTGTTGAGATCATGGCTCCTGTATTTTCTAGAGATGCATGACGGTGTGTGTGGCATATGCTTCAGAATGACCTGGTACATGGTTGAGGTCTTGACTTTGCTCTCAGAAGATGTGTAG 435 0.4138 MSFFILFFFNVFSEDFTFLLFHYDGRTTEWDEFEWSKRAIHVSVRRQTKWWYAKRFLHPDIVAPYDYIFIWDEDLGVEHFNAEESPRKQRRNRAGALTHICLPMQRLLRSWLLYFLEMHDGVCGICFRMTWYMVEVLTLLSEDV* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g0006 144 PANTHER OS06G0731900 PROTEIN 12 84 IPR007877 -
Vvi5g0006 144 Pfam Protein of unknown function (DUF707) 12 84 IPR007877 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g0006 Vvi-Chr5 32006 35867 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g0006 - - vvi:100243914 164.466