Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g0002 ATGGAGCTCCCTCAAATCCCCCAGCTGCTCAACGAAACTCTCAGCCCCGATGGAAGCGTTGTTCGTGCAGCCACGGAGTCTCTCGATCGTCTCTCTCTTCATCCAGATTTCCCTTTCTATCTACTCTCTATCACCACTGGAGGACAAAACCCTGGTCAAAGAGTGGCTGCTGCCACATATCTCAAGAACTTCACTAGGCGAAATGTGGATGGGAGCAGTCCATTTTCAAAAATTAGTAAGGAATTCAAGAACCAGCTCATGCGTGCCTTGCTTCAAGTGGAACCAGCAGTCCTAAAAATTTTTGTTGAAGCGTTCTGGGTCATTGTTGCTTCTGTGTTTGTTAAGGAGAATTCATGGCCTGAACTCGTGCCTGAACTGGCTTCTGTCATTCAAAATAGTAGTCTTATTAGTGGTGCTGCAAATTGTGAATGGAACACAATCAATGCTCTGACAGTTCTTCATTCACTTATTAGACCCTTTCAGTATTTCTTAAATCCAAAAGTTCCAAAGGAGCCTGTTCCACCACAACTAGAGCTAATCACAAAAGAAATTCTTGTGCCTTTACTGGCTGTATTTCATCATTTTGTTGAAAAGGGCCTCCATGGCACTGTATTTCATGGTCTATGA 627 0.437 MELPQIPQLLNETLSPDGSVVRAATESLDRLSLHPDFPFYLLSITTGGQNPGQRVAAATYLKNFTRRNVDGSSPFSKISKEFKNQLMRALLQVEPAVLKIFVEAFWVIVASVFVKENSWPELVPELASVIQNSSLISGAANCEWNTINALTVLHSLIRPFQYFLNPKVPKEPVPPQLELITKEILVPLLAVFHHFVEKGLHGTVFHGL* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g0002 208 PANTHER IMPORTIN-7, 8, 11 5 198 - -
Vvi5g0002 208 ProSiteProfiles Importin-beta N-terminal domain profile. 24 96 IPR001494 GO:0006886|GO:0031267
Vvi5g0002 208 Gene3D - 1 203 IPR011989 -
Vvi5g0002 208 SMART IBN_N_2 24 92 IPR001494 GO:0006886|GO:0031267
Vvi5g0002 208 Pfam Importin-beta N-terminal domain 24 90 IPR001494 GO:0006886|GO:0031267
Vvi5g0002 208 SUPERFAMILY ARM repeat 1 187 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g0002 Vvi-Chr5 10569 12724 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g0002 - - vvi:100853206 395.971