Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g0001 ATGCCATCTGCTTTGGCTCCTCTTCTTCCTTCTTTCTGTTGCGATCTACTCAGGATTCTGGGTTCTTTGAGTTTTGATCATATGGACCCGCTGGGAGAAGGGTACTTGCTGAGGCTGAAAACTGGGAAGAGGAGTTTGCTCATTTTTTGTGCTCTGGTCACTCGGCATCGGAAGTTTTCGGATAAGTTGATGCCGGACATCATAAATTGTGTTTTAAAGATTGCTGCACATAGCATAAAAATCAGTAAGCTTGATTTCCTATCAGAGAGGGTTGTTTCATTAGCTTTTAATGTCATTTCACATGTTCTGGAGACCGGCCCAGGATGGAGGCTAGTTTCCCCCAATTTTTCCTCGTTGTTGGAGTCTGCAATTTTTCCGGCATTAGTGATGAATGAAAAGGATATTTCAGAGTGGGAAGAAGACAAAGACGAGTACATACAGAAGAATCTTCCATCCGATCTTGAAGAGATTTCTGGGTGGAGAGAGGACTTGTTCACAGCCAGAAAGAGTGCAATAAATTTACTTGGTGTTATTTCAATGTCAAAGGGACCTCCAGTGGCGGCAAGTAACTGTTCTTCAGCTTTATCTAAGCGTAAAAAAGGCGAAAAGAACAGGGGAAAAGATCAACGCTGCTTTATGGGGGAGTTGCTTGTGATTCCATTTCTGTCAAAGTTTCCCATTCCCTCAGAGGCTAATGTATCTGAAACAAAGATTATAAATGATTATTATGGTGTTTTAATGGCATATGGAGGTCTTCAAGATTTTCTAAGGGAGCAGAAACCTGGATATATCTCAACTCTAATTCGTAATCGGGTGCTACCACTGTATAGAGTATCAGTTTCCCTACCTTACTTGGTTGCCACTGCAAATTGGGTTCTTGGAGAGCTTGCATCTTGTCTCCCTGAAGAGATGAGTGCAGATGTATATTCTTCGCTTCTGAAGGCATTGGCCATGCCAGATATGGGGGACGTTTCTTGTTATCCTGTGCGAGTTTCTGCTGCTGGTGCAATTGCTGGACTACTTGAGGTATGGCCTCAATTAACATTTTGA 1050 0.4257 MPSALAPLLPSFCCDLLRILGSLSFDHMDPLGEGYLLRLKTGKRSLLIFCALVTRHRKFSDKLMPDIINCVLKIAAHSIKISKLDFLSERVVSLAFNVISHVLETGPGWRLVSPNFSSLLESAIFPALVMNEKDISEWEEDKDEYIQKNLPSDLEEISGWREDLFTARKSAINLLGVISMSKGPPVAASNCSSALSKRKKGEKNRGKDQRCFMGELLVIPFLSKFPIPSEANVSETKIINDYYGVLMAYGGLQDFLREQKPGYISTLIRNRVLPLYRVSVSLPYLVATANWVLGELASCLPEEMSADVYSSLLKALAMPDMGDVSCYPVRVSAAGAIAGLLEVWPQLTF* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g0001 349 Gene3D - 1 347 IPR011989 -
Vvi5g0001 349 PANTHER IMPORTIN-7, 8, 11 1 344 - -
Vvi5g0001 349 SUPERFAMILY ARM repeat 12 345 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g0001 Vvi-Chr5 1661 4454 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g0001 - - vvi:100853206 677.167