Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1580 ATGGACAAAACCTCTCTTGGTCTTCCACCAAAATCTCTTGCTCTTGAGATTTCGCAGTTCTACACCGACTTGTTCATGCGCAGAGCATTTCTTGCATCTATTTTGCCTTTAAAGCCTGATGCCATCTTGTTTTTGGGTGATTATTTTGATGGGGGGCCTAGTCTATCAGATGAAGAATGGAAGGAATCTTCGAGTCGCTTTAAACATATTTTTGATCTAAAGACTCAAGGAAAAAGAAACATCCAAGTATACCACCTGAGTGGAAACCATGACATTGGCTATGCAAGTGTCCTCTCTCATAAGCCAGAGTGCTGGTTTAGGGTGTGGTGCATGGGTGTTTGCTCTTTTGAAGGAAAGAAATTGCAACTGGAGTGGTGGAGGCCTGAAGCTGGTTGTTTCAGGGAAGGGGCCTATGCAAAAGAATTCTGGGTGAGATTGATTAGACTACCATTGCACTTGTGGGGTAAGGACTTCTTTACGAGGGTGGGTGATGCTCGTGGAGGTTTTGTGGCTGTGGATATGGATACAACAGAGAGACGCCATTTACAATGGGCAAGAATTCTGGTCATCTCCAACAGAAGGAGGGTCCCCGGGATCCTACATGTGGTGGTGGAGTCTTCAGTCTTTGTCCTTGAGTCATGGTGGGAGATCCCACCATGGGTGTTGGTGGTTATTTCAACGGAGGGTTGCAGGGTAATGGAGGTTAGGGATGATTGTGAGGGGAGGCCACGCACAGAGTGGAGTGTGGGGATTGAGGTTTGGAAGCGTGCAAAAAGATTGGAGCTGCCCAAGAATCGTTTGTGTATTGCTCAAGTTTCAGTTGGCACACCTTTTTCTGCCTACAGCAGAGATTTGGGGGCTGGTGGGCAGGTTGAGGGAATGGTCTTTAGGCCTCTATTTTGGCTCAAGTGGGGCTGGTGGGCCAAGCAGTATCAAGGCCTCTTTCTCCTACAGGCCGGGAGGTGGGAGGCCTTGAGTGCCTTGGTTGTCAGGCGCTATGAACAAGAATTTGGTATCAGGAACTACCGATTTACTGTTGGAAAAGTGGAGTTCGTTGTTGTTGATGCTCAAACTCTAGATGGGCATTCACAAGGAAGCTTGACCTCTGCATCCTGGGATTTTATCAAAAATGTCTCCATGGATGTTAACTTGAATCCGAGGGTTCTTTTAACCCATATTCCGCTGTATCGTCCGGACTGGACAACCTGTGGTCCTTATCGTTATTCCCCAGTCATTAATCAGAGAGTTTTTCGTGCTATTCACGATCAAGAAATAGTGTACCAGAATTATATAACTGAAGAAAAATCAAAGTACTTGCTGGACTTGCTCAGACCTGTACTCATCCTGTCTGGTCATGATCATGATCAGTGTACAGTCACCCACATGTCAAAGCATGGGCCTGTAATGGAGCATACTGTGGGGACTATAAGTTGGCAGCAAGGGAACTTGTATCCATCTTTCATGCTATTATCTGCAAGTAATGATACAATACAAAATGACTCCAGTCTACAAGATGCAATCTCCACTCAGCTGTGCTTTCTTCCCATGCAGACACATATTTATATATGGTATCTTTTTCAATTTGTTCTGACCCTTCTTGCCCTCCTCCTCTGGCCAACAAATGGCTTGGGCTCTTGGCGCCACTGTAGGGTTTTCATGGAGTATACCAGAAGTCTAATAAGTAGTAACATCCTCAGAAGTGGAGCAAAAGAAAAAAATGAAGATGAGAACTGTGAGTACGAAATGATTTGGGATGCAGAAGGATCCATGCATCTTGTCAAAAAAACCTCCAAGGCCCCTCTTACACGCTCAAGTGAGAGGGGTTTGTCAGAAAGGGGTAATGCTGTGATGCGGTCAACAGCTAAAAGGCAGATCTCTCAGGAGACGGAGCTCTCTACAGCTGTGGACATGAACATGGATGTGGAATTGGATATGATGGCAAAATTACCACCCAGAGCAAGTAAATCAAGGACAAAGAAGGTGATTCGTAGGTTAATGCGTACACTACGAATGCTTACAGTCATTGCTGCTGTGAACGTCCCACTTTACATGATGTTGCTTTTCAAGGATTGGACTGAGCAATAA 2085 0.4547 MDKTSLGLPPKSLALEISQFYTDLFMRRAFLASILPLKPDAILFLGDYFDGGPSLSDEEWKESSSRFKHIFDLKTQGKRNIQVYHLSGNHDIGYASVLSHKPECWFRVWCMGVCSFEGKKLQLEWWRPEAGCFREGAYAKEFWVRLIRLPLHLWGKDFFTRVGDARGGFVAVDMDTTERRHLQWARILVISNRRRVPGILHVVVESSVFVLESWWEIPPWVLVVISTEGCRVMEVRDDCEGRPRTEWSVGIEVWKRAKRLELPKNRLCIAQVSVGTPFSAYSRDLGAGGQVEGMVFRPLFWLKWGWWAKQYQGLFLLQAGRWEALSALVVRRYEQEFGIRNYRFTVGKVEFVVVDAQTLDGHSQGSLTSASWDFIKNVSMDVNLNPRVLLTHIPLYRPDWTTCGPYRYSPVINQRVFRAIHDQEIVYQNYITEEKSKYLLDLLRPVLILSGHDHDQCTVTHMSKHGPVMEHTVGTISWQQGNLYPSFMLLSASNDTIQNDSSLQDAISTQLCFLPMQTHIYIWYLFQFVLTLLALLLWPTNGLGSWRHCRVFMEYTRSLISSNILRSGAKEKNEDENCEYEMIWDAEGSMHLVKKTSKAPLTRSSERGLSERGNAVMRSTAKRQISQETELSTAVDMNMDVELDMMAKLPPRASKSRTKKVIRRLMRTLRMLTVIAAVNVPLYMMLLFKDWTEQ* 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1580 694 PANTHER METALLO PHOSPHOESTERASE RELATED 2 619 IPR033308 GO:0006506
Vvi4g1580 694 SUPERFAMILY Metallo-dependent phosphatases 28 493 IPR029052 -
Vvi4g1580 694 Pfam Domain of unknown function (DUF4283) 77 189 IPR025558 -
Vvi4g1580 694 Pfam Calcineurin-like phosphoesterase 30 118 IPR004843 GO:0016787
Vvi4g1580 694 Gene3D - 18 181 IPR029052 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1580 K23362 - vvi:100256904 717.998