Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1577 ATGGCCGCCGGCGACATCCCGTCGATTGATATGCAAGACTTTCCTAGGCAATTCCGGAGGCTGAGAGAAGCATGCGAGGAATGGGGTTGTTTCAGAGTTGTTAACCATAGCATCCCTCCATCTTTATTGTCTGAAATGAAGTCCGTCGTCGGATCTCTCCTTGACCTTCCCCTGGAAGTCAAACGCCGGAACACTGACGTGATAGCTGGCAGCGGCTACATGGCACCCAGCAAGGTCAATCCTCTTTACGAGGCCTTGGGTCTCTACGACATGGCCTCCCACCAGGCTGTGGATGCATTTTGTTCTCAGTTAGATGCCTCTCCTCACCAAAGGGAGACAATAAAGATCTACGCCAAAGCAGTGCAGGAGCTGGCCATGGATATCGGGAACAAGCTGGCAGAAACCATGGGGTTAGGAGGCGATTTGTTCAAGGAATGGCCCTGCCAGTTTAGGATAAACAAATACAACTTCACTCCTGAAACTGTGGGTTCCCCGGGCGTCCAAATCCACACAGATTCCAGCTTCCTTACCATACTCCAGGACGATGAAAATGTAGGGGGCCTTGAAGTGATGGACAAGTCTGGCGCATTTGTTGCGGTGGATCCCATGCCAGGGACTCTCCTTGTCAATCTGGGAGACATTGCCACGGTGTGGAGCAACGGAAGATTGTGCAACGTGAAGCATAGGGTACAATGCAAGGAGGCAGCAGTGCGATTGTCAATTGCTTCTTTTCTGCTAGGGCCCAAGGATGCAGCAGTGGAAGCCCCGCCGGAGCTGGTGGACTCCGAACACCCTCGCCTTTTTGTTCCCGTCACCTATGAGGATTATAGAAAACTCCGCCTCTCTACCAAATTGCAGGCTGGTGAAGCTCTGGCGCTTGTGCGCGTCGACTCCTAG 897 0.5273 MAAGDIPSIDMQDFPRQFRRLREACEEWGCFRVVNHSIPPSLLSEMKSVVGSLLDLPLEVKRRNTDVIAGSGYMAPSKVNPLYEALGLYDMASHQAVDAFCSQLDASPHQRETIKIYAKAVQELAMDIGNKLAETMGLGGDLFKEWPCQFRINKYNFTPETVGSPGVQIHTDSSFLTILQDDENVGGLEVMDKSGAFVAVDPMPGTLLVNLGDIATVWSNGRLCNVKHRVQCKEAAVRLSIASFLLGPKDAAVEAPPELVDSEHPRLFVPVTYEDYRKLRLSTKLQAGEALALVRVDS* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1577 298 FunFam 2-oxoglutarate-dependent dioxygenase DAO 4 293 - -
Vvi4g1577 298 Pfam 2OG-Fe(II) oxygenase superfamily 149 245 IPR044861 -
Vvi4g1577 298 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 144 248 IPR005123 -
Vvi4g1577 298 Pfam non-haem dioxygenase in morphine synthesis N-terminal 6 75 IPR026992 -
Vvi4g1577 298 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 6 280 - -
Vvi4g1577 298 Gene3D - 4 295 IPR027443 -
Vvi4g1577 298 SUPERFAMILY Clavaminate synthase-like 5 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1577 Vvi-Chr4 23794903 23796634 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g1577 5 296 Glycosyltransferase AT5G59530 27.244 1.63e-26 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1577 K23947 - vvi:100246634 599.356