Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1576 ATGGAAGGGGATCTGAAGAAGCGTCTTGTCCAAGAAACTGGGGGAAATGAGATAGATGATCAGGAGTGTTTGCAACAGGTAGAGGTGAAGGATGGATCAAAGTTGTTGCTCTTGGAGGAAATGACAAGCAAAGAGAGAAAACTTGAAGAGGAGAGAAGAAGTGATGAGATATCAAAGGCATGTAAATCTATCACTGAAGTCAAAGCAAAAGTTGATAAGCTCTTGGAAAAGGTGGTTGCCTTAGAAGCAACTGTGAATGGTGGGACTACTGTTGAGGACAAGGAGTTTGTTGTCTTAATAGAGTTGCTCATGAGGCAGTTATTGAAATTGGATGGCATCGAGGCTGAAGGAGAAGCAAAGGTGTAG 366 0.4262 MEGDLKKRLVQETGGNEIDDQECLQQVEVKDGSKLLLLEEMTSKERKLEEERRSDEISKACKSITEVKAKVDKLLEKVVALEATVNGGTTVEDKEFVVLIELLMRQLLKLDGIEAEGEAKV* 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1576 121 ProSiteProfiles BAG domain profile. 60 119 IPR003103 GO:0051087
Vvi4g1576 121 SUPERFAMILY BAG domain 43 120 IPR036533 GO:0051087
Vvi4g1576 121 Gene3D BAG domain 40 121 IPR036533 GO:0051087
Vvi4g1576 121 PANTHER BCL2-ASSOCIATED ATHANOGENE 14 121 IPR039773 GO:0051087
Vvi4g1576 121 Pfam BAG domain 64 120 IPR003103 GO:0051087
Vvi4g1576 121 Coils Coil 64 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1576 Vvi-Chr4 23784004 23784476 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1576 - - vri:117920329 192.586