Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1571 ATGCCTATGGTAATCTTTGGATATGAGCCACATTCAATTCTGCTAACTAGTTTCGTTGCACTTGCTGATTTTACAGGTTTCATGCCTCTCCCAAGAATTAAATTCCTCGCCATTAGTGCTGTGTTCTACACACCATTCCTGCAGCATGTATGGACTTGGTTGGGTTTTACACCAGCAGCGAAGAAAATTTTTACCTCCCTACTGGGATCTGGTCATAGTTGCATCATAGTGCCAGGTGGAGTGCAAGAGCCATGCCTTATGGAGCACGGTTGTGAGATTGCCTTCCTCAAGTCCAGAAAAGGATTTGTTCACATAGCCATGGAGATGGGACGGTCGCTGGTTCCAGTTTTCTGCTTTGGTCAGATCTCATTTACCTTTACCAGCATTCAGTGCATGTGGTGGTGGGTAGGCCAATTGAGATTAAGCAAAATCCACAACCCACTGTGGAAGAGGTGTGGATCAGGTCAGTTTGCTGATGCACTCAAAAGATCTCTTTGA 498 0.4538 MPMVIFGYEPHSILLTSFVALADFTGFMPLPRIKFLAISAVFYTPFLQHVWTWLGFTPAAKKIFTSLLGSGHSCIIVPGGVQEPCLMEHGCEIAFLKSRKGFVHIAMEMGRSLVPVFCFGQISFTFTSIQCMWWWVGQLRLSKIHNPLWKRCGSGQFADALKRSL* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1571 165 PANTHER DIACYLGLYCEROL O-ACYLTRANSFERASE 5 124 - -
Vvi4g1571 165 Pfam Diacylglycerol acyltransferase 5 122 IPR007130 GO:0008374
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1571 Vvi-Chr4 23750885 23753791 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g1571 5 121 Acyl Lipid Metabolism Gene Families AT3G51520 66.667 5.51e-52 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1571 K22848 - vvi:100258437 204.142