Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1570 ATGTCTGGGAAGATGGGAAAGGGGATGGAGGAGAGGAAGGAGCAGTGGGGGAGCAGCGGCAGTGTAGAGGAAACACTGACGGTATTCCAGGGAAGAGAGGACGATTCCCTAATCCACTCTATAGCGGCTCTCACCATATGGTTAGGGGCCATCCATTTCGTCGTCGCTTTGGTCCTTACGGCCTTGCTATTCCTTCCGCTTTCCCTGGCCCTCACGGTTTTTGGGTTGCTTTTAGTCTTTATGGTGATTCCAATTGATGAAAGGAGCAAATATGGGAGAAAACTATCCAGGTATATCTGTAAGCATGCTTGCGGTTATTTTCCGGTGACTCTATATGTGGAGGATATAAAAGCGTTCGACCCCAATCGTGCCTATGTATTTGGTTATGAGCCACATTCAGTTCTGCCAATTGGTGTTGTTGCACTTGCTGACCTTACAGGTTTCCTGCCTCTCTCAAAAATTAAAGTCCTTGCAAGTAGTGCTGTGTTCTACGTGCCATTCCTGCGGCATATATGGACTTGGTTGGGTCTTACACCTGCAACAAAGAAAAATTTTACCTCCCTCTTGGCATCTGGTTATAGTTGCATCATAGTGCCAGGTGGAGTGCAAGAGCCATGTCTTATGGAGCACGGTTGTGAGGTTGCCTTCCTCAAGTCAAGAAAAGGATTTGTTCGCATAGCCATGGAGATGGGACGGCCCTTGGTTCCAGTTTTCTGCTTTGGTCAGTCTCGCGTCTATAAGTGGTGGAAACCTGGTGGGAACTTGTACCTGCAATTTTCTAGAGCTATCAAGTTTACCCCCATTTTCTTTTGGGGAATATTTGGATCTCCTTTACCCTACCGACATCCAATGGATGTGGTGGTGGGTAGACCGATTGAGGTTAAGAAAAATGTGCAACCTACTGTGGAAGAGGTCATTGAAGTACATGGTCAGTTTGTTGAGGCACTTAATGATCTATTTGAAAAGCACAAAGCAAGAGTTGGCCACGCCGATCTTCAGTTAAAAATTCTTTGA 1014 0.4625 MSGKMGKGMEERKEQWGSSGSVEETLTVFQGREDDSLIHSIAALTIWLGAIHFVVALVLTALLFLPLSLALTVFGLLLVFMVIPIDERSKYGRKLSRYICKHACGYFPVTLYVEDIKAFDPNRAYVFGYEPHSVLPIGVVALADLTGFLPLSKIKVLASSAVFYVPFLRHIWTWLGLTPATKKNFTSLLASGYSCIIVPGGVQEPCLMEHGCEVAFLKSRKGFVRIAMEMGRPLVPVFCFGQSRVYKWWKPGGNLYLQFSRAIKFTPIFFWGIFGSPLPYRHPMDVVVGRPIEVKKNVQPTVEEVIEVHGQFVEALNDLFEKHKARVGHADLQLKIL* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1570 337 CDD LPLAT_MGAT-like 106 325 - -
Vvi4g1570 337 PANTHER DIACYLGLYCEROL O-ACYLTRANSFERASE 33 334 - -
Vvi4g1570 337 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 154 307 - -
Vvi4g1570 337 Pfam Diacylglycerol acyltransferase 62 334 IPR007130 GO:0008374
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1570 Vvi-Chr4 23723685 23736873 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g1570 29 337 Acyl Lipid Metabolism Gene Families AT3G51520 72.492 1.13e-168 470
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1570 K22848 - vvi:100258437 669.463